BLASTX nr result

ID: Coptis23_contig00021903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021903
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   208   3e-52
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   207   9e-52
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-51
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   202   3e-50

>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  208 bits (530), Expect = 3e-52
 Identities = 101/110 (91%), Positives = 104/110 (94%)
 Frame = -1

Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152
           +KTTGGRNGYGAKLTNIFSTEFVIETADGKR KKYKQVFSNNMGKKSEP ITKCKEGENW
Sbjct: 132 KKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFSNNMGKKSEPMITKCKEGENW 191

Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2
           TKVTFK DLAKF M HLE+DVVALMKKRV+DIAGCLGKTVKVELNG RVP
Sbjct: 192 TKVTFKADLAKFSMTHLEEDVVALMKKRVVDIAGCLGKTVKVELNGSRVP 241


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  207 bits (526), Expect = 9e-52
 Identities = 99/110 (90%), Positives = 105/110 (95%)
 Frame = -1

Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152
           +KTTGGRNGYGAKLTNIFSTEFVIETADG+R KKYKQVFSNNMGKKSEP ITKCKE ENW
Sbjct: 151 KKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVFSNNMGKKSEPVITKCKERENW 210

Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2
           TKV+FKPDLAKF M HLEDDVVALMKKRV+DIAGCLGKTVKVELNG+R+P
Sbjct: 211 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDIAGCLGKTVKVELNGQRIP 260


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  207 bits (526), Expect = 9e-52
 Identities = 99/110 (90%), Positives = 105/110 (95%)
 Frame = -1

Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152
           +KTTGGRNGYGAKLTNIFSTEFVIETADG+R KKYKQVFSNNMGKKSEP ITKCKE ENW
Sbjct: 151 KKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVFSNNMGKKSEPVITKCKERENW 210

Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2
           TKV+FKPDLAKF M HLEDDVVALMKKRV+DIAGCLGKTVKVELNG+R+P
Sbjct: 211 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDIAGCLGKTVKVELNGQRIP 260


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
           predicted protein [Populus trichocarpa]
          Length = 1482

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/110 (90%), Positives = 104/110 (94%)
 Frame = -1

Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152
           +KTTGGRNGYGAKLTNIFSTEFVIETADGKR KKYKQVFSNNMGK+SEP ITKCKE ENW
Sbjct: 149 KKTTGGRNGYGAKLTNIFSTEFVIETADGKRKKKYKQVFSNNMGKRSEPIITKCKESENW 208

Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2
           TKVTFKPDLAKF M HLE+DVVALMKKRV+D+AGCLGKTVKVELNG RVP
Sbjct: 209 TKVTFKPDLAKFSMTHLEEDVVALMKKRVVDMAGCLGKTVKVELNGSRVP 258


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score =  202 bits (513), Expect = 3e-50
 Identities = 95/110 (86%), Positives = 105/110 (95%)
 Frame = -1

Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152
           +KTTGGRNGYGAKLTNIFS+EFVIETADG+RLKKYKQVF++NMGKKSEP ITKCK G+NW
Sbjct: 153 KKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCKAGDNW 212

Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2
           T+VTFKPDL KF M HLEDDVVALMKKRV+D+AGCLGKTVKVELNG+RVP
Sbjct: 213 TRVTFKPDLXKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVP 262


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