BLASTX nr result
ID: Coptis23_contig00021903
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021903 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 208 3e-52 emb|CBI24922.3| unnamed protein product [Vitis vinifera] 207 9e-52 ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 207 9e-52 ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2... 206 1e-51 ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 202 3e-50 >ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1| predicted protein [Populus trichocarpa] Length = 1468 Score = 208 bits (530), Expect = 3e-52 Identities = 101/110 (91%), Positives = 104/110 (94%) Frame = -1 Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152 +KTTGGRNGYGAKLTNIFSTEFVIETADGKR KKYKQVFSNNMGKKSEP ITKCKEGENW Sbjct: 132 KKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFSNNMGKKSEPMITKCKEGENW 191 Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2 TKVTFK DLAKF M HLE+DVVALMKKRV+DIAGCLGKTVKVELNG RVP Sbjct: 192 TKVTFKADLAKFSMTHLEEDVVALMKKRVVDIAGCLGKTVKVELNGSRVP 241 >emb|CBI24922.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 207 bits (526), Expect = 9e-52 Identities = 99/110 (90%), Positives = 105/110 (95%) Frame = -1 Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152 +KTTGGRNGYGAKLTNIFSTEFVIETADG+R KKYKQVFSNNMGKKSEP ITKCKE ENW Sbjct: 151 KKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVFSNNMGKKSEPVITKCKERENW 210 Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2 TKV+FKPDLAKF M HLEDDVVALMKKRV+DIAGCLGKTVKVELNG+R+P Sbjct: 211 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDIAGCLGKTVKVELNGQRIP 260 >ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera] Length = 1489 Score = 207 bits (526), Expect = 9e-52 Identities = 99/110 (90%), Positives = 105/110 (95%) Frame = -1 Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152 +KTTGGRNGYGAKLTNIFSTEFVIETADG+R KKYKQVFSNNMGKKSEP ITKCKE ENW Sbjct: 151 KKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVFSNNMGKKSEPVITKCKERENW 210 Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2 TKV+FKPDLAKF M HLEDDVVALMKKRV+DIAGCLGKTVKVELNG+R+P Sbjct: 211 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDIAGCLGKTVKVELNGQRIP 260 >ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1| predicted protein [Populus trichocarpa] Length = 1482 Score = 206 bits (525), Expect = 1e-51 Identities = 99/110 (90%), Positives = 104/110 (94%) Frame = -1 Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152 +KTTGGRNGYGAKLTNIFSTEFVIETADGKR KKYKQVFSNNMGK+SEP ITKCKE ENW Sbjct: 149 KKTTGGRNGYGAKLTNIFSTEFVIETADGKRKKKYKQVFSNNMGKRSEPIITKCKESENW 208 Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2 TKVTFKPDLAKF M HLE+DVVALMKKRV+D+AGCLGKTVKVELNG RVP Sbjct: 209 TKVTFKPDLAKFSMTHLEEDVVALMKKRVVDMAGCLGKTVKVELNGSRVP 258 >ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis sativus] Length = 1460 Score = 202 bits (513), Expect = 3e-50 Identities = 95/110 (86%), Positives = 105/110 (95%) Frame = -1 Query: 331 RKTTGGRNGYGAKLTNIFSTEFVIETADGKRLKKYKQVFSNNMGKKSEPSITKCKEGENW 152 +KTTGGRNGYGAKLTNIFS+EFVIETADG+RLKKYKQVF++NMGKKSEP ITKCK G+NW Sbjct: 153 KKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCKAGDNW 212 Query: 151 TKVTFKPDLAKFKMDHLEDDVVALMKKRVIDIAGCLGKTVKVELNGKRVP 2 T+VTFKPDL KF M HLEDDVVALMKKRV+D+AGCLGKTVKVELNG+RVP Sbjct: 213 TRVTFKPDLXKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVP 262