BLASTX nr result

ID: Coptis23_contig00021894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021894
         (2615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu...   170   2e-39
ref|XP_003532176.1| PREDICTED: uncharacterized protein LOC100813...   166   4e-38
ref|XP_003530798.1| PREDICTED: uncharacterized protein LOC100782...   162   3e-37
ref|XP_003551437.1| PREDICTED: uncharacterized protein LOC100811...   159   3e-36
ref|XP_003551440.1| PREDICTED: uncharacterized protein LOC100813...   157   1e-35

>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
            gi|223537989|gb|EEF39602.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 702

 Score =  170 bits (431), Expect = 2e-39
 Identities = 107/290 (36%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
 Frame = +2

Query: 176  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXS-FPPVGGVGLSGVAPHVNPS 352
            HP SMMGQGFDPA                          S FPPVGGVGL GVAPHVNP+
Sbjct: 420  HPNSMMGQGFDPAFGAPMGRMGSYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPA 479

Query: 353  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAG--RXXXXXXXXXXXXHQY 526
            FF                 D   M MWSDPS  GW  ED  G               HQY
Sbjct: 480  FFGRGMPMNGMGMMPTTGVDGPNMGMWSDPSMGGWGVEDHGGGRAGESSYGEEAASDHQY 539

Query: 527  XXXXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED--GYNNEYVX 700
                       N +K+KDR SERDWSGSSDR+YRD+R+   DRD+PR++D  G+++++  
Sbjct: 540  GEVSHDRGGWQNTMKEKDRASERDWSGSSDRRYRDDREAGYDRDMPREKDMGGHDHDW-- 597

Query: 701  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDREPEYDDMGH 880
                                                           Y++    Y D  +
Sbjct: 598  --PERRHREDRDVGRERDRERERDRERSRDRERERERDRDRDRDHDRYREDRDRYAD--N 653

Query: 881  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDVSKRRRLPSE 1030
            ++Y+DR  E+D+DWDRGRSSR ++KSR+S E   R+R  D  KRRRL SE
Sbjct: 654  HRYRDREVEHDDDWDRGRSSRTHTKSRLSQERS-RSRDADYGKRRRLTSE 702


>ref|XP_003532176.1| PREDICTED: uncharacterized protein LOC100813702 [Glycine max]
          Length = 693

 Score =  166 bits (419), Expect = 4e-38
 Identities = 99/292 (33%), Positives = 135/292 (46%), Gaps = 7/292 (2%)
 Frame = +2

Query: 176  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXXSFPPVGGVGLSGVAPHVNPSF 355
            HPQSMM QGFDPA                          SFP VGGVGL GVAPHVNP+F
Sbjct: 417  HPQSMMNQGFDPAFGPMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAF 476

Query: 356  FXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXXX 535
            F                 D   M MWSDP+  GW GE+P G               +   
Sbjct: 477  FGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYG 536

Query: 536  XXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXXX 712
                      +++KDR SERDWSG+S+R+YRD+RD   DRD P+++D G+++E+      
Sbjct: 537  EVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYDRDAPKEKDMGHDHEW------ 590

Query: 713  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDREPEYDD----MGH 880
                                                       Y++R+   +D      H
Sbjct: 591  ---------SERRHRDDRETGRERSRDRDRERSRDRDRDRERDYRERDRHKEDRDRYADH 641

Query: 881  NKYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1030
            ++Y+DR  E+D++W+RGRSS+ +SKS++S EE++ +R RD    KRRRL SE
Sbjct: 642  HRYRDREAEHDDEWERGRSSKPHSKSQLSQEEEHHSRPRDADYGKRRRLTSE 693


>ref|XP_003530798.1| PREDICTED: uncharacterized protein LOC100782869 [Glycine max]
          Length = 668

 Score =  162 bits (411), Expect = 3e-37
 Identities = 100/289 (34%), Positives = 134/289 (46%), Gaps = 4/289 (1%)
 Frame = +2

Query: 176  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXX-SFPPVGGVGLSGVAPHVNPS 352
            HPQSMM QGFDPA                           SFP VGGVGL GVAPHVNP+
Sbjct: 391  HPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPA 450

Query: 353  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXX 532
            FF                 D   M MWSDP+  GW GE+P G               +  
Sbjct: 451  FFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQY 510

Query: 533  XXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXX 709
                       +++KDR SERDWSG+S+R+YRD+RD   +RD P++ED G+++E+     
Sbjct: 511  GEVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYERDAPKEEDMGHDHEW----- 565

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDREPEYDDMGHNKY 889
                                                        +++   +Y D  H++Y
Sbjct: 566  ----SERRHRDDRETGRERSRDRDRERSRDRDRDRERDHRERDRHREDRDKYAD--HHRY 619

Query: 890  KDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1030
            +DR  E+D++W+RGRSSR +SKSR+S EE++ +R RD    KRRRL SE
Sbjct: 620  RDREAEHDDEWERGRSSRMHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 668


>ref|XP_003551437.1| PREDICTED: uncharacterized protein LOC100811056 [Glycine max]
          Length = 698

 Score =  159 bits (403), Expect = 3e-36
 Identities = 100/289 (34%), Positives = 128/289 (44%), Gaps = 4/289 (1%)
 Frame = +2

Query: 176  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXX-SFPPVGGVGLSGVAPHVNPS 352
            HPQSMM QGFDPA                           SFP VGGVGL GVAPHVNP+
Sbjct: 419  HPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPA 478

Query: 353  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXX 532
            FF                 D   M MWSDP+  GW GE+P G                  
Sbjct: 479  FFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQY 538

Query: 533  XXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXX 709
                       +++KDR SERDWSGSS+R+YRD+RD   +RD  R++D G+++E+     
Sbjct: 539  GEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDHEWSERRH 598

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDREPEYDDMGHNKY 889
                                                        Y D         H++Y
Sbjct: 599  RDDRETGRERSRDRDRDRERSRDRDRDREKDHRERDRHREDRERYAD---------HHRY 649

Query: 890  KDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDVS--KRRRLPSE 1030
            +DR  E+D++W+RGRSSR +SKSR+S EE++ +R RD    KRRRL SE
Sbjct: 650  RDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYVKRRRLTSE 698


>ref|XP_003551440.1| PREDICTED: uncharacterized protein LOC100813748 [Glycine max]
          Length = 696

 Score =  157 bits (397), Expect = 1e-35
 Identities = 101/291 (34%), Positives = 131/291 (45%), Gaps = 6/291 (2%)
 Frame = +2

Query: 176  HPQSMMGQGFDPAXXXXXXXXXXXXXXXXXXXXXXXXXX-SFPPVGGVGLSGVAPHVNPS 352
            HPQSMM QGFDPA                           SFP VGGVGL GVAPHVNP+
Sbjct: 419  HPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPA 478

Query: 353  FFXXXXXXXXXXXXXXXXXDRQGMNMWSDPSAAGWAGEDPAGRXXXXXXXXXXXXHQYXX 532
            FF                 D   M MWSDP+  GW GE+P G                  
Sbjct: 479  FFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQY 538

Query: 533  XXXXXXXXXNALKDKDRVSERDWSGSSDRKYRDERDPEADRDIPRDED-GYNNEYVXXXX 709
                       +++KDR SERDWSGSS+R+YRD+RD   +RD  R++D G+++E+     
Sbjct: 539  GEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDHEW----- 593

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDREPEYDD--MGHN 883
                                                         +DR  E  D    H+
Sbjct: 594  --------SERRHRDDRETGRERSRDRERSRDRDRDRDREKDLRERDRHREDRDGYADHH 645

Query: 884  KYKDRAPEYDEDWDRGRSSRAYSKSRVSYEEDYRARGRDV--SKRRRLPSE 1030
            +++DR  E+D++W+RGRSSR +SKSR+S EE++ +R RD    KRRRL SE
Sbjct: 646  RFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 696


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