BLASTX nr result

ID: Coptis23_contig00021893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021893
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547178.1| PREDICTED: uncharacterized protein LOC100792...   117   4e-24
ref|XP_003543000.1| PREDICTED: uncharacterized protein LOC100779...   114   3e-23
gb|ACU17984.1| unknown [Glycine max]                                  113   5e-23
ref|XP_002518954.1| conserved hypothetical protein [Ricinus comm...   113   5e-23
ref|XP_002277018.1| PREDICTED: uncharacterized protein LOC100254...   111   1e-22

>ref|XP_003547178.1| PREDICTED: uncharacterized protein LOC100792242 [Glycine max]
          Length = 161

 Score =  117 bits (292), Expect = 4e-24
 Identities = 61/120 (50%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
 Frame = -3

Query: 549 KKHDQSTTQGGNRKQLHNEIREMTTALTHHLNDLHHIGKSSSTRHGESEDEQDVTVITLA 370
           K       +G   K L  EIREM +A+TH + D H   K  ST H E+EDE D+ +ITLA
Sbjct: 8   KSSQSPPAEGDKHKHLDREIREMVSAITHRVTDFH---KPGSTHHLENEDEHDMRIITLA 64

Query: 369 GNNIGATMQGELEEISDAE---EDKAFTTYTNSNFQAINNSIMFGGSYTSKDPGVHIETS 199
           G N GAT++ EL+E S      E +A +T+ NSNFQAINNSIM GGSY + DPGVH++ S
Sbjct: 65  GTNDGATLRSELDEKSAKTSHGEPEALSTFVNSNFQAINNSIMLGGSYQANDPGVHLDIS 124


>ref|XP_003543000.1| PREDICTED: uncharacterized protein LOC100779414 [Glycine max]
          Length = 161

 Score =  114 bits (284), Expect = 3e-23
 Identities = 59/120 (49%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
 Frame = -3

Query: 549 KKHDQSTTQGGNRKQLHNEIREMTTALTHHLNDLHHIGKSSSTRHGESEDEQDVTVITLA 370
           K       +G   K L  EIREM +A+TH + D H   K+ ST H E E E D  +ITL 
Sbjct: 8   KSSQSPPAEGDKHKHLDREIREMVSAITHRVTDFH---KAGSTHHLEKEHEDDTRIITLT 64

Query: 369 GNNIGATMQGELEEISDAE---EDKAFTTYTNSNFQAINNSIMFGGSYTSKDPGVHIETS 199
           G N GAT++ EL+E S      E +  +T+ NSNFQAINNSIMFGGSY + DPGVH++ S
Sbjct: 65  GTNDGATLRSELDEKSGKTSHGESEELSTFVNSNFQAINNSIMFGGSYQANDPGVHLDIS 124


>gb|ACU17984.1| unknown [Glycine max]
          Length = 161

 Score =  113 bits (282), Expect = 5e-23
 Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
 Frame = -3

Query: 525 QGGNRKQLHNEIREMTTALTHHLNDLHHIGKSSSTRHGESEDEQDVTVITLAGNNIGATM 346
           +G   K L  EIREM +A+TH + D H   K+ ST H E E E D  +ITL G N GAT+
Sbjct: 16  EGDKHKHLDREIREMVSAITHRVTDFH---KAGSTHHLEKEHEDDTRIITLTGTNDGATL 72

Query: 345 QGELEEISDAE---EDKAFTTYTNSNFQAINNSIMFGGSYTSKDPGVHIETS 199
           + EL+E S      E +  +T+ NSNFQAINNSIMFGGSY + DPGVH++ S
Sbjct: 73  RSELDEKSGKTSHGESEELSTFVNSNFQAINNSIMFGGSYQANDPGVHLDIS 124


>ref|XP_002518954.1| conserved hypothetical protein [Ricinus communis]
           gi|223541941|gb|EEF43487.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 165

 Score =  113 bits (282), Expect = 5e-23
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 7/135 (5%)
 Frame = -3

Query: 567 VITMVLKKHDQSTTQGGNRKQLHNEIREMTTALTHHLNDLHHIGKSSSTRHGESEDEQDV 388
           +++    K  QS++     K    E+R+M  A+T  + DLH  G S   R  E EDE  +
Sbjct: 1   MLSETTNKTTQSSSDANKHKPFDREVRDMVNAITSRVGDLHKPGASHHHRQTE-EDEHGI 59

Query: 387 TVITLAGNNIGATMQGELEE-------ISDAEEDKAFTTYTNSNFQAINNSIMFGGSYTS 229
            +ITLAG N GATM+ EL+E       +S  ++ +A  TY NSNFQA+NNSIMFG SY++
Sbjct: 60  RIITLAGTNTGATMRSELDEKGTTPQGVSGDDQPEALGTYVNSNFQAVNNSIMFGSSYST 119

Query: 228 KDPGVHIETSMDYFE 184
            DPGVH++ S D+FE
Sbjct: 120 NDPGVHLDIS-DFFE 133


>ref|XP_002277018.1| PREDICTED: uncharacterized protein LOC100254752 [Vitis vinifera]
          Length = 158

 Score =  111 bits (278), Expect = 1e-22
 Identities = 56/114 (49%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
 Frame = -3

Query: 525 QGGNRKQLHNEIREMTTALTHHLNDLHHIGKSSSTRHGESEDEQDVTVITLAGNNIGATM 346
           +G  +KQ   EIR+M +ALT+ L+DL  + K  S++  + ED++ V +ITLAG+N GATM
Sbjct: 11  EGEKQKQFDREIRDMISALTNRLSDLQQVQKQGSSQQ-DDEDDRGVRIITLAGSNTGATM 69

Query: 345 QGELEEIS-----DAEEDKAFTTYTNSNFQAINNSIMFGGSYTSKDPGVHIETS 199
           +GEL+E          E++A  TY NSNFQ++NNSIM GGSY++ DPGVH++ S
Sbjct: 70  RGELDEKPGHPGLSVGENEALNTYVNSNFQSVNNSIMMGGSYSTNDPGVHMDIS 123


Top