BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021891
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             271   1e-70
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             260   3e-67
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                253   4e-65
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]   234   1e-59
emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]   234   1e-59

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  271 bits (692), Expect = 1e-70
 Identities = 129/245 (52%), Positives = 182/245 (74%)
 Frame = -2

Query: 761  FERLRQNKMKLNPAKCVFGVASGKFLGYLVSQRRIEANLEQIRALLERPEPTTKQQIYKL 582
            F+ L    MKLNP KC FGV SG+FLGY+V++R IEAN +QIRA+LE P P   +++ +L
Sbjct: 999  FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1058

Query: 581  SGMVSALNRFILRASDKCRPFLQILRKGATFTWTDECHKAFTDLKAYLSTPPIMSKPEEG 402
            +G ++ALNRFI R++DKC PF  +L++ A F W  +  +AF  LK YLSTPPI+ KPE G
Sbjct: 1059 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1118

Query: 401  ETLGLYLATTDFAISSVLFRKHDGVEKPVYFTNKTLADAEKHYSPMEKAMLSLLYSARKF 222
            ETL LY+A +D A+SSVL R+  G ++P+++T+K+L +AE  Y  +EKA L+++ SARK 
Sbjct: 1119 ETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKL 1178

Query: 221  RPYFQSHSIKVITDVPIKQVLSSNNKTARMAKWAEELGEHHIEFVPRTSRKSQVVADFLV 42
            RPYFQSH+I V+TD P++  L S +++ RM KWA EL E+ I+F PR + KSQV+ADFL+
Sbjct: 1179 RPYFQSHTIAVLTDQPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLI 1238

Query: 41   DFPVE 27
            + P++
Sbjct: 1239 ELPLQ 1243


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  260 bits (664), Expect = 3e-67
 Identities = 125/252 (49%), Positives = 178/252 (70%)
 Frame = -2

Query: 761 FERLRQNKMKLNPAKCVFGVASGKFLGYLVSQRRIEANLEQIRALLERPEPTTKQQIYKL 582
           F  L + +MKLNPAKC FGV SG+FLGY+V++R IEAN  QI A L  P P   +++ +L
Sbjct: 196 FGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERGIEANSNQINAFLNMPSPRNFKEVQRL 255

Query: 581 SGMVSALNRFILRASDKCRPFLQILRKGATFTWTDECHKAFTDLKAYLSTPPIMSKPEEG 402
           +G ++ALNRFI R++DK  PF QIL+    F W ++C +AF  LKAYL+TPPI+SKPE  
Sbjct: 256 TGRIAALNRFISRSTDKSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVD 315

Query: 401 ETLGLYLATTDFAISSVLFRKHDGVEKPVYFTNKTLADAEKHYSPMEKAMLSLLYSARKF 222
           E L LY++ ++ A+S VL R+  G +KP+Y+ +K++ D E  Y+ MEK  L+++ SARK 
Sbjct: 316 EKLYLYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKL 375

Query: 221 RPYFQSHSIKVITDVPIKQVLSSNNKTARMAKWAEELGEHHIEFVPRTSRKSQVVADFLV 42
           RPYFQSH ++V+T+ P++ +L S +++ R+AKWA EL E+ IEF  R S K+QV+ADFL 
Sbjct: 376 RPYFQSHPVQVLTNQPLRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLT 435

Query: 41  DFPVEDINWEPE 6
           + P+      PE
Sbjct: 436 ELPIPGTIERPE 447


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  253 bits (645), Expect = 4e-65
 Identities = 115/250 (46%), Positives = 179/250 (71%)
 Frame = -2

Query: 761  FERLRQNKMKLNPAKCVFGVASGKFLGYLVSQRRIEANLEQIRALLERPEPTTKQQIYKL 582
            F  LR++K++LN +KC FGV SGKFLGY+++ R IE N +QI+A+LE   P   +++ KL
Sbjct: 268  FSVLRKHKLRLNASKCSFGVDSGKFLGYMITHRGIEFNPDQIKAILELHPPRNPKEVQKL 327

Query: 581  SGMVSALNRFILRASDKCRPFLQILRKGATFTWTDECHKAFTDLKAYLSTPPIMSKPEEG 402
            +GM + LNRFI R++D+CRPF ++L K   F WTDEC+ AF DL+ YL+ P I+S+PE+ 
Sbjct: 328  AGMFAVLNRFISRSADRCRPFYRLLHKWKDFLWTDECNLAFEDLRQYLANPLILSRPEKK 387

Query: 401  ETLGLYLATTDFAISSVLFRKHDGVEKPVYFTNKTLADAEKHYSPMEKAMLSLLYSARKF 222
            E L  YLA  ++A+S VL R  DGV+KP+Y+ +K+L +AE+ Y P+EKA+L+++++ RK 
Sbjct: 388  EVLYAYLAVMNYAVSLVLIRNDDGVQKPIYYISKSLQEAERRYLPLEKALLAVVHATRKL 447

Query: 221  RPYFQSHSIKVITDVPIKQVLSSNNKTARMAKWAEELGEHHIEFVPRTSRKSQVVADFLV 42
              YFQ+H+I V+T +P++ ++   + T R+AKW  +LG + ++++PRT+ K Q + DF+ 
Sbjct: 448  PHYFQAHTIVVLTQLPLQAIMRKLDYTGRVAKWGTKLGAYDVKYMPRTAIKGQDLVDFVA 507

Query: 41   DFPVEDINWE 12
            +F   D   E
Sbjct: 508  EFTESDTKQE 517


>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
          Length = 987

 Score =  234 bits (598), Expect = 1e-59
 Identities = 117/243 (48%), Positives = 164/243 (67%), Gaps = 1/243 (0%)
 Frame = -2

Query: 761 FERLRQNKMKLNPAKCVFGVASGKFLGYLVSQRRIEANLEQIRALLERPEPTTKQQIYKL 582
           F  LR+  MKLNP+KC FGV++GKFLG++VSQR IE + +Q++A++E P P  K+++ +L
Sbjct: 196 FYLLRRYGMKLNPSKCAFGVSAGKFLGFMVSQRGIEVSPDQVKAVMETPPPRNKKELQRL 255

Query: 581 SGMVSALNRFILRASDKCRPFLQILRKGATFTWTDECHKAFTDLKAYLSTPPIMSKPEEG 402
           +G + AL RFI R +D+ RPF   +RK  T  WTD C  A   +K YL  PPI+S P   
Sbjct: 256 TGKLVALGRFIARFTDELRPFFLAIRKAGTHGWTDNCQNALERIKHYLMQPPILSSPIPK 315

Query: 401 ETLGLYLATTDFAISSVLFRKHDGVE-KPVYFTNKTLADAEKHYSPMEKAMLSLLYSARK 225
           E L +YLA +++AIS VLFR     E KP+Y+ ++ LAD E  YS ME   L+L  +A+K
Sbjct: 316 EKLYMYLAVSEWAISVVLFRCPSPKEQKPIYYVSRALADVETRYSKMELTALALRSAAQK 375

Query: 224 FRPYFQSHSIKVITDVPIKQVLSSNNKTARMAKWAEELGEHHIEFVPRTSRKSQVVADFL 45
            RPYFQ+H + V+TD P++ +L   + T RM +WA EL E  IEF PR S K QV+ADF+
Sbjct: 376 LRPYFQAHPVIVLTDQPLRNILHKPDLTGRMLQWAIELSEFGIEFQPRLSMKGQVMADFV 435

Query: 44  VDF 36
           +++
Sbjct: 436 LEY 438


>emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]
          Length = 965

 Score =  234 bits (597), Expect = 1e-59
 Identities = 116/243 (47%), Positives = 164/243 (67%), Gaps = 1/243 (0%)
 Frame = -2

Query: 761 FERLRQNKMKLNPAKCVFGVASGKFLGYLVSQRRIEANLEQIRALLERPEPTTKQQIYKL 582
           F  LR+  MKLNP+KC FGV++GKFLG++VSQR IE + EQ++ ++E P P  K+++ +L
Sbjct: 196 FHLLRRYGMKLNPSKCAFGVSAGKFLGFMVSQRGIEVSPEQVKTVMETPPPRNKKELQRL 255

Query: 581 SGMVSALNRFILRASDKCRPFLQILRKGATFTWTDECHKAFTDLKAYLSTPPIMSKPEEG 402
           +G + AL RFI R +++ RPF   + K     WTD C  AF  +K YL  PPI+S P   
Sbjct: 256 TGKLVALGRFIARFTEELRPFFLAISKAGAQGWTDSCQNAFEKIKHYLMQPPILSSPIPK 315

Query: 401 ETLGLYLATTDFAISSVLFRKHDGVE-KPVYFTNKTLADAEKHYSPMEKAMLSLLYSARK 225
           E L +YLA +++AIS+VLFR     E KPVY+ ++ LAD E  YS ME   L+L  +A+K
Sbjct: 316 EKLYMYLAVSEWAISAVLFRYPSPKEQKPVYYVSRALADVETRYSKMELTALALRSAAQK 375

Query: 224 FRPYFQSHSIKVITDVPIKQVLSSNNKTARMAKWAEELGEHHIEFVPRTSRKSQVVADFL 45
            RPYFQ+H + V+TD P++ +L   + T RM +WA EL E  IEF PR S+K QV+ADF+
Sbjct: 376 LRPYFQAHPVIVLTDQPLRSILHKPDLTGRMLQWAIELSEFGIEFQPRLSKKGQVMADFV 435

Query: 44  VDF 36
           +++
Sbjct: 436 LEY 438