BLASTX nr result

ID: Coptis23_contig00021887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021887
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; Alt...    46   2e-06
gb|AAR16718.2| ATPase subunit 6 [Pisum sativum]                        46   2e-06
gb|AFB35028.1| ATPase subunit 6 (mitochondrion) [Phormium tenax]       46   2e-06
gb|AFB35039.1| ATPase subunit 6, partial (mitochondrion) [Hemiph...    46   2e-06
gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea]                  46   2e-06

>sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; AltName: Full=F-ATPase
           protein 6 gi|14119|emb|CAA38183.1| mitochondrial ATPase
           F(0) complex, subunit 6 [Vicia faba]
          Length = 291

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381
           L  PELG+A+S AHVSTISICIYLN+
Sbjct: 252 LTGPELGVAISQAHVSTISICIYLND 277



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 502 LYFIGDIGPLFILLAL 455
           LYFIGD+GPLFI+LAL
Sbjct: 237 LYFIGDLGPLFIVLAL 252


>gb|AAR16718.2| ATPase subunit 6 [Pisum sativum]
          Length = 279

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381
           L  PELG+A+S AHVSTISICIYLN+
Sbjct: 248 LTGPELGVAISQAHVSTISICIYLND 273



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 502 LYFIGDIGPLFILLAL 455
           LYFIGD+GPLFI+LAL
Sbjct: 233 LYFIGDLGPLFIVLAL 248


>gb|AFB35028.1| ATPase subunit 6 (mitochondrion) [Phormium tenax]
          Length = 272

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381
           L  PELG+A+S AHVSTISICIYLN+
Sbjct: 235 LTGPELGVAISQAHVSTISICIYLND 260



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 502 LYFIGDIGPLFILLAL 455
           LYFIGD+GPLFI+LAL
Sbjct: 220 LYFIGDLGPLFIVLAL 235


>gb|AFB35039.1| ATPase subunit 6, partial (mitochondrion) [Hemiphylacus
           alatostylus]
          Length = 245

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381
           L  PELG+A+S AHVSTISICIYLN+
Sbjct: 208 LTGPELGVAISQAHVSTISICIYLND 233



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 502 LYFIGDIGPLFILLAL 455
           LYFIGD+GPLFI+LAL
Sbjct: 193 LYFIGDLGPLFIVLAL 208


>gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea]
          Length = 222

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381
           L  PELG+A+S AHVSTISICIYLN+
Sbjct: 193 LTGPELGVAISQAHVSTISICIYLND 218



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 502 LYFIGDIGPLFILLAL 455
           LYFIGD+GPLFI+LAL
Sbjct: 178 LYFIGDLGPLFIVLAL 193


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