BLASTX nr result
ID: Coptis23_contig00021887
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021887 (1260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; Alt... 46 2e-06 gb|AAR16718.2| ATPase subunit 6 [Pisum sativum] 46 2e-06 gb|AFB35028.1| ATPase subunit 6 (mitochondrion) [Phormium tenax] 46 2e-06 gb|AFB35039.1| ATPase subunit 6, partial (mitochondrion) [Hemiph... 46 2e-06 gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea] 46 2e-06 >sp|Q04654.1|ATP6_VICFA RecName: Full=ATP synthase subunit a; AltName: Full=F-ATPase protein 6 gi|14119|emb|CAA38183.1| mitochondrial ATPase F(0) complex, subunit 6 [Vicia faba] Length = 291 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381 L PELG+A+S AHVSTISICIYLN+ Sbjct: 252 LTGPELGVAISQAHVSTISICIYLND 277 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = -3 Query: 502 LYFIGDIGPLFILLAL 455 LYFIGD+GPLFI+LAL Sbjct: 237 LYFIGDLGPLFIVLAL 252 >gb|AAR16718.2| ATPase subunit 6 [Pisum sativum] Length = 279 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381 L PELG+A+S AHVSTISICIYLN+ Sbjct: 248 LTGPELGVAISQAHVSTISICIYLND 273 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = -3 Query: 502 LYFIGDIGPLFILLAL 455 LYFIGD+GPLFI+LAL Sbjct: 233 LYFIGDLGPLFIVLAL 248 >gb|AFB35028.1| ATPase subunit 6 (mitochondrion) [Phormium tenax] Length = 272 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381 L PELG+A+S AHVSTISICIYLN+ Sbjct: 235 LTGPELGVAISQAHVSTISICIYLND 260 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = -3 Query: 502 LYFIGDIGPLFILLAL 455 LYFIGD+GPLFI+LAL Sbjct: 220 LYFIGDLGPLFIVLAL 235 >gb|AFB35039.1| ATPase subunit 6, partial (mitochondrion) [Hemiphylacus alatostylus] Length = 245 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381 L PELG+A+S AHVSTISICIYLN+ Sbjct: 208 LTGPELGVAISQAHVSTISICIYLND 233 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = -3 Query: 502 LYFIGDIGPLFILLAL 455 LYFIGD+GPLFI+LAL Sbjct: 193 LYFIGDLGPLFIVLAL 208 >gb|ACD02191.1| ATPase subunit 6 [Sarracenia purpurea] Length = 222 Score = 45.8 bits (107), Expect(2) = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 Query: 458 LANPELGIAMSHAHVSTISICIYLNE 381 L PELG+A+S AHVSTISICIYLN+ Sbjct: 193 LTGPELGVAISQAHVSTISICIYLND 218 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = -3 Query: 502 LYFIGDIGPLFILLAL 455 LYFIGD+GPLFI+LAL Sbjct: 178 LYFIGDLGPLFIVLAL 193