BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021856
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    65   8e-09
ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata sub...    62   7e-08
ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] ...    56   4e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
 Frame = +3

Query: 3    VGYDQMVYLLDPFTSSRVPFPPLSAFDD-PIMIDQKPGFNRM--CCIKKAMIFCVPSSSP 173
            +G D  + LL+P T  ++  P L A  +   +ID     +R     I KA++   PSS  
Sbjct: 1017 IGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSPD 1076

Query: 174  AIYDEKMRFMVFLIYSEARKAAFSSPGDECWTALQTPSG-IHDILCFSGVFYAVDFQGSV 350
                      V +IYS+  + AF+ PG + WT L++ SG + DI+ F+G F AV+    V
Sbjct: 1077 CA--------VMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEV 1128

Query: 351  WRINVSEGSDHARTRI--FPPVEDAE--MGDRFYLVEVSGALHLVVRIMH 488
            W  ++S GS     R    P ++D +    +  YLVE  G +++V R ++
Sbjct: 1129 WICDIS-GSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLY 1177


>ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311913|gb|EFH42337.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = +3

Query: 21  VYLLDPFTSSRVPFPPLSAFDDPIMIDQKPGFNRMCCIKKAMIFCVPSSSPAIYDEKMRF 200
           V+L +PFT S    PPL +F+D   + Q           K  +    SS+  + DE   +
Sbjct: 110 VHLRNPFTKSVTSLPPLISFEDVQRLLQSQAIFPDSEALKNFVKKAVSSTSLLDDE---W 166

Query: 201 MVFLIYSEARKAAFSSPGDECWTALQT-PSGIHDILCFSGVFYAVDFQGSVWRINVSEGS 377
           +V +IY+  RK AF   GD+ WT L++  S + DI+  +GVF+A+D  G ++   +S  S
Sbjct: 167 VVLVIYNTDRKLAFCRRGDKQWTDLESVASAVDDIVFCNGVFFAIDRFGEIYHCELSPNS 226

Query: 378 DHA 386
             A
Sbjct: 227 PKA 229


>ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana]
           gi|142991284|sp|Q9FLP7.2|FB294_ARATH RecName:
           Full=Putative F-box protein At5g55150
           gi|332009209|gb|AED96592.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 360

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +3

Query: 27  LLDPFTSSRVPFPPLSAFDDPIMIDQKPGFNRMCCIKKAMIFCVPSSSPAIYDEKMRFMV 206
           L  P T S    PPL +F+D   + Q           K  I    SS+  + DE   ++V
Sbjct: 100 LTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAVSSTSLLDDE---WVV 156

Query: 207 FLIYSEARKAAFSSPGDECWTALQT-PSGIHDILCFSGVFYAVDFQGSVWRINVSEGSDH 383
            +IY+  RK AF   GD+ WT L++  S + DI+  +GVF+A+D  G ++   +S  +  
Sbjct: 157 LVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGVFFAIDRLGEIYHCELSANNPK 216

Query: 384 A 386
           A
Sbjct: 217 A 217