BLASTX nr result

ID: Coptis23_contig00021855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021855
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
emb|CBI22055.3| unnamed protein product [Vitis vinifera]              192   2e-47
gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indi...   172   3e-41
ref|NP_001058915.2| Os07g0154400 [Oryza sativa Japonica Group] g...   172   3e-41
ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis th...   168   5e-40

>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  197 bits (500), Expect = 1e-48
 Identities = 99/152 (65%), Positives = 120/152 (78%)
 Frame = -2

Query: 459  KSKGETIQRILHIYFENSESTADLLEEFACSILPQAPSCNTRSSEEAPHGFPTLCATTFV 280
            K+KGE +Q+IL IY ENSES +DLL++ ACSILP   S  T + E+  HGFPTLC  TFV
Sbjct: 1208 KNKGEIVQKILQIYLENSESKSDLLDKLACSILPVVSSSGT-TVEDDHHGFPTLCNATFV 1266

Query: 279  IWYRVSYEENHAILNKLVKEVTLLEKSRANIQVESVKGVLSKLHQSVNVVVSLVNMCKAH 100
            +W RV +E N AILNKLVKE+ L  K RA +Q+E+V+  L K+ +SVNVVVSLVN+C+ H
Sbjct: 1267 VWCRVLHEGNIAILNKLVKEIALFMKPRAAVQIEAVEKHLIKIQKSVNVVVSLVNLCRTH 1326

Query: 99   DKVVVHALAVKYGGKFVDSFLKVFDFLQAHFQ 4
            DKV V A++VKYGGKFVDSFLKVFDFLQAHFQ
Sbjct: 1327 DKVTVRAMSVKYGGKFVDSFLKVFDFLQAHFQ 1358


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  192 bits (488), Expect = 2e-47
 Identities = 102/153 (66%), Positives = 117/153 (76%)
 Frame = -2

Query: 459  KSKGETIQRILHIYFENSESTADLLEEFACSILPQAPSCNTRSSEEAPHGFPTLCATTFV 280
            K KGE +QRIL IY  NSEST+DLL E A SILPQA S  T   ++  HGFPTLC  TF 
Sbjct: 1240 KRKGEIVQRILQIYLGNSESTSDLLHELAFSILPQAQSSKTTEEDDC-HGFPTLCPATFN 1298

Query: 279  IWYRVSYEENHAILNKLVKEVTLLEKSRANIQVESVKGVLSKLHQSVNVVVSLVNMCKAH 100
            IWYRV +EEN AILNKLV  V   EKSRA +Q+ +V+ +L KL +S NV+VSLVNMC+  
Sbjct: 1299 IWYRVLHEENLAILNKLVSLVHS-EKSRAGVQLGTVEELLIKLQKSANVLVSLVNMCRTQ 1357

Query: 99   DKVVVHALAVKYGGKFVDSFLKVFDFLQAHFQV 1
            DKV VHA+AVKYGGKFVDSFLKVFDFLQ HFQ+
Sbjct: 1358 DKVAVHAMAVKYGGKFVDSFLKVFDFLQIHFQM 1390


>gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indica Group]
            gi|222636453|gb|EEE66585.1| hypothetical protein
            OsJ_23134 [Oryza sativa Japonica Group]
          Length = 1489

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/151 (54%), Positives = 117/151 (77%)
 Frame = -2

Query: 459  KSKGETIQRILHIYFENSESTADLLEEFACSILPQAPSCNTRSSEEAPHGFPTLCATTFV 280
            +SKG+ IQ+IL IY +NS+ST+DLL+E ACS+LP+ PS  T S+++  HGFPTLCA+T +
Sbjct: 1212 QSKGDLIQKILQIYLKNSDSTSDLLDELACSVLPKVPSFKTGSTQDMSHGFPTLCASTIL 1271

Query: 279  IWYRVSYEENHAILNKLVKEVTLLEKSRANIQVESVKGVLSKLHQSVNVVVSLVNMCKAH 100
             WYRV +EEN   LNK++K+     K++A  +  +V+  L ++ +SV V VSL+NMCK H
Sbjct: 1272 SWYRVVHEENTGNLNKMIKQAL---KTKAQSE-RAVETSLEEIQKSVLVFVSLINMCKTH 1327

Query: 99   DKVVVHALAVKYGGKFVDSFLKVFDFLQAHF 7
            +KVV+HA+AVK+GG+FVD+FLK F+FL+ HF
Sbjct: 1328 EKVVMHAMAVKHGGRFVDTFLKAFNFLETHF 1358


>ref|NP_001058915.2| Os07g0154400 [Oryza sativa Japonica Group]
            gi|255677527|dbj|BAF20829.2| Os07g0154400 [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/151 (54%), Positives = 117/151 (77%)
 Frame = -2

Query: 459  KSKGETIQRILHIYFENSESTADLLEEFACSILPQAPSCNTRSSEEAPHGFPTLCATTFV 280
            +SKG+ IQ+IL IY +NS+ST+DLL+E ACS+LP+ PS  T S+++  HGFPTLCA+T +
Sbjct: 1148 QSKGDLIQKILQIYLKNSDSTSDLLDELACSVLPKVPSFKTGSTQDMSHGFPTLCASTIL 1207

Query: 279  IWYRVSYEENHAILNKLVKEVTLLEKSRANIQVESVKGVLSKLHQSVNVVVSLVNMCKAH 100
             WYRV +EEN   LNK++K+     K++A  +  +V+  L ++ +SV V VSL+NMCK H
Sbjct: 1208 SWYRVVHEENTGNLNKMIKQAL---KTKAQSE-RAVETSLEEIQKSVLVFVSLINMCKTH 1263

Query: 99   DKVVVHALAVKYGGKFVDSFLKVFDFLQAHF 7
            +KVV+HA+AVK+GG+FVD+FLK F+FL+ HF
Sbjct: 1264 EKVVMHAMAVKHGGRFVDTFLKAFNFLETHF 1294


>ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis thaliana]
            gi|332658132|gb|AEE83532.1| fanconi anemia group D2
            protein [Arabidopsis thaliana]
          Length = 1489

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/151 (57%), Positives = 112/151 (74%), Gaps = 2/151 (1%)
 Frame = -2

Query: 450  GETIQRILHIYFENSESTADLLEEFACSILPQAP-SCNTRSSEEA-PHGFPTLCATTFVI 277
            GE +Q IL IY E S ST+DLL+E AC+ILPQA  S +T   ++A  H FPTLCA TF  
Sbjct: 1246 GEMVQTILRIYLEASGSTSDLLDELACTILPQASLSKSTGEDDDARDHEFPTLCAATFRG 1305

Query: 276  WYRVSYEENHAILNKLVKEVTLLEKSRANIQVESVKGVLSKLHQSVNVVVSLVNMCKAHD 97
            WY+   EEN AILNKLVK V+   + R N Q ++ +  L  + ++VNVVVSLVN+C++H+
Sbjct: 1306 WYKTLLEENLAILNKLVKTVS--SEKRQNCQPKTTEAHLKNIQKTVNVVVSLVNLCRSHE 1363

Query: 96   KVVVHALAVKYGGKFVDSFLKVFDFLQAHFQ 4
            KV +H +A+KYGGK+VDSFLKVFDFL+AHFQ
Sbjct: 1364 KVTIHGMAIKYGGKYVDSFLKVFDFLEAHFQ 1394


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