BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021852
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group] g...   145   3e-33
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
emb|CBI28813.3| unnamed protein product [Vitis vinifera]              139   2e-31

>ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 544

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/116 (62%), Positives = 87/116 (75%)
 Frame = +3

Query: 3   SIQIDNMIHEFISGDKSHPRYVAICEKLAVVEKRISADGYKAETSVILYDIDEEEKEQSL 182
           S+++D  IHEFISGDKSHP Y  I  KL  +  R+   GY  ET+ + YDI++EEKEQ+L
Sbjct: 414 SVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQAL 473

Query: 183 GHHSEKLAIGFGLISTPPSTTLRIVKNLRVCTDCHNASKLISKKCDREIVVRDRIR 350
           G+HSEKLAI FGLI  PP  T+RIVKNLR CTDCH+ +KL+SK   REIVVRDR R
Sbjct: 474 GYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRAR 529


>ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
           gi|24414187|dbj|BAC22429.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa
           Japonica Group] gi|125559498|gb|EAZ05034.1| hypothetical
           protein OsI_27217 [Oryza sativa Indica Group]
           gi|125601406|gb|EAZ40982.1| hypothetical protein
           OsJ_25464 [Oryza sativa Japonica Group]
          Length = 544

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/116 (60%), Positives = 86/116 (74%)
 Frame = +3

Query: 3   SIQIDNMIHEFISGDKSHPRYVAICEKLAVVEKRISADGYKAETSVILYDIDEEEKEQSL 182
           SI+I++ IHEF+SGDKSHP Y  I  KLA +  R+   GY  ET+ + YD++EEEKEQ+L
Sbjct: 414 SIEINDSIHEFVSGDKSHPSYNDIHAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQAL 473

Query: 183 GHHSEKLAIGFGLISTPPSTTLRIVKNLRVCTDCHNASKLISKKCDREIVVRDRIR 350
           GHHSEKLAI FGLI  PP+  +RIVKNLR C DCH  +KL+S+    EIVVRDR R
Sbjct: 474 GHHSEKLAIAFGLIGGPPNVAIRIVKNLRFCADCHKFAKLVSQIYHWEIVVRDRAR 529


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/115 (59%), Positives = 85/115 (73%)
 Frame = +3

Query: 6   IQIDNMIHEFISGDKSHPRYVAICEKLAVVEKRISADGYKAETSVILYDIDEEEKEQSLG 185
           I + + IHEF++GD SHP+   I  KL  + + + A GYK +T  +L D+DEEEKE +L 
Sbjct: 511 IDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALC 570

Query: 186 HHSEKLAIGFGLISTPPSTTLRIVKNLRVCTDCHNASKLISKKCDREIVVRDRIR 350
           HHSEKLAI FGLI T P TT+RI KNLRVC DCH+A+KLISK  +REI+VRDR R
Sbjct: 571 HHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCR 625


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|449529652|ref|XP_004171812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/115 (58%), Positives = 87/115 (75%)
 Frame = +3

Query: 6   IQIDNMIHEFISGDKSHPRYVAICEKLAVVEKRISADGYKAETSVILYDIDEEEKEQSLG 185
           I+IDN I+EF++GDKSH ++  I E +  + + +   GY+  TS +L DI+EE+KE SL 
Sbjct: 477 IEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLN 536

Query: 186 HHSEKLAIGFGLISTPPSTTLRIVKNLRVCTDCHNASKLISKKCDREIVVRDRIR 350
            HSEKLAI FGL+ TPP T +RIVKNLRVC+DCH+ASK ISK  DREI++RDR R
Sbjct: 537 RHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNR 591


>emb|CBI28813.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/109 (61%), Positives = 82/109 (75%)
 Frame = +3

Query: 24  IHEFISGDKSHPRYVAICEKLAVVEKRISADGYKAETSVILYDIDEEEKEQSLGHHSEKL 203
           IHEF++GD SHP+   I  KL  + + + A GYK +T  +L D+DEEEKE +L HHSEKL
Sbjct: 377 IHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKL 436

Query: 204 AIGFGLISTPPSTTLRIVKNLRVCTDCHNASKLISKKCDREIVVRDRIR 350
           AI FGLI T P TT+RI KNLRVC DCH+A+KLISK  +REI+VRDR R
Sbjct: 437 AIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCR 485