BLASTX nr result

ID: Coptis23_contig00021849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021849
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cuc...    75   6e-12
ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    75   6e-12
ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu...    74   1e-11
ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidop...    69   3e-10

>ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cucumis sativus]
          Length = 1331

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
 Frame = +1

Query: 13   MGPISGIGNMGQNTMN---PSSINNAINQQLLSGNITHAQATVMASKFKLA--RANMSRV 177
            MG I  +GN GQN MN    SS NNA+NQQ  +G +T AQA   A KF++A  R  +   
Sbjct: 1065 MGSIPAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQA--QAYKFRMAQNRGMLGAA 1122

Query: 178  TQSGITGLTGTGQMHPGSPGFSMLG 252
            +QS ITG+ G  QMHP S G SMLG
Sbjct: 1123 SQSAITGIPGARQMHPSSGGLSMLG 1147


>ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101212313
            [Cucumis sativus]
          Length = 1307

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
 Frame = +1

Query: 13   MGPISGIGNMGQNTMN---PSSINNAINQQLLSGNITHAQATVMASKFKLA--RANMSRV 177
            MG I  +GN GQN MN    SS NNA+NQQ  +G +T AQA   A KF++A  R  +   
Sbjct: 1065 MGSIPAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQA--QAYKFRMAQNRGMLGAA 1122

Query: 178  TQSGITGLTGTGQMHPGSPGFSMLG 252
            +QS ITG+ G  QMHP S G SMLG
Sbjct: 1123 SQSAITGIPGARQMHPSSGGLSMLG 1147


>ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis]
            gi|223531373|gb|EEF33209.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1374

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
 Frame = +1

Query: 1    ISPSMGPISGIGNMGQNTMNPS---SINNAINQQLLSGNITHAQATVMASKFKLA--RAN 165
            IS SM PISG+ N+GQN +N S   ++ N I+Q   +G +T  QA  + SK ++A  R +
Sbjct: 1093 ISGSMAPISGMNNVGQNQINLSQTTNLPNVISQHFRAGQVTPQQAAYL-SKLRMAQNRTS 1151

Query: 166  MSRVTQSGITGLTGTGQMHPGSPGFSMLG 252
            M    QSGI G++G  QMHPGS G SMLG
Sbjct: 1152 MLGAPQSGIAGMSGARQMHPGSAGLSMLG 1180


>ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|222873307|gb|EEF10438.1|
            predicted protein [Populus trichocarpa]
          Length = 1341

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1    ISPSMGPISGIGNMGQNTMNPSSINN--AINQQLLSGNITHAQATVMASKFKLARANMSR 174
            IS  M PI+G+ N  QN +N     N  A+NQQL +G++  A A ++  K ++ RA++  
Sbjct: 1085 ISGPMAPITGMSNASQNPINLGHTQNINALNQQLRTGHMMPAAAQMV--KQRINRASVLG 1142

Query: 175  VTQSGITGLTGTGQMHPGSPGFSMLG 252
              QSGI G++G  QMHPGS GFSMLG
Sbjct: 1143 GAQSGIAGMSGARQMHPGSAGFSMLG 1168


>gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidopsis thaliana]
          Length = 1088

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
 Frame = +1

Query: 1    ISPSMGPISGIGNMGQNTMN--PSSINNAINQQLLSGNITHAQATVMASKFKLARANMSR 174
            IS SM  + GIGNMGQN MN  P+S  NAI+QQL SG +T  Q   + ++ ++  AN   
Sbjct: 806  ISSSMS-VPGIGNMGQNPMNLNPASNLNAISQQLRSGALT-PQQNALFTQIRMGMANRGG 863

Query: 175  VT---QSGITGLTGTGQMHPGSPGFSML 249
            V    Q+GI+G++GT QMHP S G SML
Sbjct: 864  VMGAPQTGISGVSGTRQMHPSSAGLSML 891


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