BLASTX nr result
ID: Coptis23_contig00021848
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021848 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cuc... 80 2e-13 ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 80 2e-13 ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu... 71 8e-11 gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidop... 70 2e-10 ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arab... 70 2e-10 >ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cucumis sativus] Length = 1331 Score = 80.1 bits (196), Expect = 2e-13 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -1 Query: 229 PGIGNMGQNPMN---PSSINNVINQQLLSGNIAQATLMASKFKFAQNRANMARATQSGIT 59 P +GN GQNPMN SS NN +NQQ +G + A A KF+ AQNR + A+QS IT Sbjct: 1069 PAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQAQAYKFRMAQNRGMLGAASQSAIT 1128 Query: 58 GLTGTGQMLPGSAGFSMLG 2 G+ G QM P S G SMLG Sbjct: 1129 GIPGARQMHPSSGGLSMLG 1147 >ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101212313 [Cucumis sativus] Length = 1307 Score = 80.1 bits (196), Expect = 2e-13 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -1 Query: 229 PGIGNMGQNPMN---PSSINNVINQQLLSGNIAQATLMASKFKFAQNRANMARATQSGIT 59 P +GN GQNPMN SS NN +NQQ +G + A A KF+ AQNR + A+QS IT Sbjct: 1069 PAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQAQAYKFRMAQNRGMLGAASQSAIT 1128 Query: 58 GLTGTGQMLPGSAGFSMLG 2 G+ G QM P S G SMLG Sbjct: 1129 GIPGARQMHPSSGGLSMLG 1147 >ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis] gi|223531373|gb|EEF33209.1| DNA binding protein, putative [Ricinus communis] Length = 1374 Score = 71.2 bits (173), Expect = 8e-11 Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 6/88 (6%) Frame = -1 Query: 247 ISPSMGP--GIGNMGQNPMNPS---SINNVINQQLLSGNIA-QATLMASKFKFAQNRANM 86 IS SM P G+ N+GQN +N S ++ NVI+Q +G + Q SK + AQNR +M Sbjct: 1093 ISGSMAPISGMNNVGQNQINLSQTTNLPNVISQHFRAGQVTPQQAAYLSKLRMAQNRTSM 1152 Query: 85 ARATQSGITGLTGTGQMLPGSAGFSMLG 2 A QSGI G++G QM PGSAG SMLG Sbjct: 1153 LGAPQSGIAGMSGARQMHPGSAGLSMLG 1180 >gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidopsis thaliana] Length = 1088 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 5/86 (5%) Frame = -1 Query: 247 ISPSMG-PGIGNMGQNPMN--PSSINNVINQQLLSGNIA-QATLMASKFKFAQ-NRANMA 83 IS SM PGIGNMGQNPMN P+S N I+QQL SG + Q + ++ + NR + Sbjct: 806 ISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGVM 865 Query: 82 RATQSGITGLTGTGQMLPGSAGFSML 5 A Q+GI+G++GT QM P SAG SML Sbjct: 866 GAPQTGISGVSGTRQMHPSSAGLSML 891 >ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata] gi|297333274|gb|EFH63692.1| hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata] Length = 1310 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 5/86 (5%) Frame = -1 Query: 247 ISPSMG-PGIGNMGQNPMN--PSSINNVINQQLLSGNIA-QATLMASKFKFAQ-NRANMA 83 IS SM PGIGNMGQNPMN P+S N I+QQL SG + Q + ++ + NR + Sbjct: 1026 ISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGVM 1085 Query: 82 RATQSGITGLTGTGQMLPGSAGFSML 5 A Q+GI+G++GT QM P SAG SML Sbjct: 1086 GAPQAGISGVSGTRQMHPSSAGISML 1111