BLASTX nr result

ID: Coptis23_contig00021848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021848
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cuc...    80   2e-13
ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    80   2e-13
ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu...    71   8e-11
gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidop...    70   2e-10
ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arab...    70   2e-10

>ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cucumis sativus]
          Length = 1331

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -1

Query: 229  PGIGNMGQNPMN---PSSINNVINQQLLSGNIAQATLMASKFKFAQNRANMARATQSGIT 59
            P +GN GQNPMN    SS NN +NQQ  +G +  A   A KF+ AQNR  +  A+QS IT
Sbjct: 1069 PAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQAQAYKFRMAQNRGMLGAASQSAIT 1128

Query: 58   GLTGTGQMLPGSAGFSMLG 2
            G+ G  QM P S G SMLG
Sbjct: 1129 GIPGARQMHPSSGGLSMLG 1147


>ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101212313
            [Cucumis sativus]
          Length = 1307

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -1

Query: 229  PGIGNMGQNPMN---PSSINNVINQQLLSGNIAQATLMASKFKFAQNRANMARATQSGIT 59
            P +GN GQNPMN    SS NN +NQQ  +G +  A   A KF+ AQNR  +  A+QS IT
Sbjct: 1069 PAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQAQAYKFRMAQNRGMLGAASQSAIT 1128

Query: 58   GLTGTGQMLPGSAGFSMLG 2
            G+ G  QM P S G SMLG
Sbjct: 1129 GIPGARQMHPSSGGLSMLG 1147


>ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis]
            gi|223531373|gb|EEF33209.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1374

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
 Frame = -1

Query: 247  ISPSMGP--GIGNMGQNPMNPS---SINNVINQQLLSGNIA-QATLMASKFKFAQNRANM 86
            IS SM P  G+ N+GQN +N S   ++ NVI+Q   +G +  Q     SK + AQNR +M
Sbjct: 1093 ISGSMAPISGMNNVGQNQINLSQTTNLPNVISQHFRAGQVTPQQAAYLSKLRMAQNRTSM 1152

Query: 85   ARATQSGITGLTGTGQMLPGSAGFSMLG 2
              A QSGI G++G  QM PGSAG SMLG
Sbjct: 1153 LGAPQSGIAGMSGARQMHPGSAGLSMLG 1180


>gb|AAG52583.1|AC016529_14 unknown protein; 66073-62011 [Arabidopsis thaliana]
          Length = 1088

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
 Frame = -1

Query: 247  ISPSMG-PGIGNMGQNPMN--PSSINNVINQQLLSGNIA-QATLMASKFKFAQ-NRANMA 83
            IS SM  PGIGNMGQNPMN  P+S  N I+QQL SG +  Q   + ++ +    NR  + 
Sbjct: 806  ISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGVM 865

Query: 82   RATQSGITGLTGTGQMLPGSAGFSML 5
             A Q+GI+G++GT QM P SAG SML
Sbjct: 866  GAPQTGISGVSGTRQMHPSSAGLSML 891


>ref|XP_002887433.1| hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp.
            lyrata] gi|297333274|gb|EFH63692.1| hypothetical protein
            ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata]
          Length = 1310

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
 Frame = -1

Query: 247  ISPSMG-PGIGNMGQNPMN--PSSINNVINQQLLSGNIA-QATLMASKFKFAQ-NRANMA 83
            IS SM  PGIGNMGQNPMN  P+S  N I+QQL SG +  Q   + ++ +    NR  + 
Sbjct: 1026 ISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGVM 1085

Query: 82   RATQSGITGLTGTGQMLPGSAGFSML 5
             A Q+GI+G++GT QM P SAG SML
Sbjct: 1086 GAPQAGISGVSGTRQMHPSSAGISML 1111


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