BLASTX nr result
ID: Coptis23_contig00021826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021826
(939 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157550.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 93 8e-33
ref|XP_004142485.1| PREDICTED: uncharacterized membrane protein ... 93 7e-31
ref|XP_002876256.1| hypothetical protein ARALYDRAFT_485854 [Arab... 93 7e-27
ref|NP_001118837.1| Early-responsive to dehydration stress prote... 93 1e-26
ref|NP_191015.2| Early-responsive to dehydration stress protein ... 93 1e-26
>ref|XP_004157550.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein
YLR241W-like [Cucumis sativus]
Length = 711
Score = 93.2 bits (230), Expect(2) = 8e-33
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 272 QIQDVYETVYDTGGLCWPYIHHYVIFAIFLMQITMIGLFGLKSKPSASISTIPLFVFTIL 451
Q++DVY T YDT GL WP+IHHY+I I LMQ+TMIGLFGLKSKP+ASI TIPL + T+
Sbjct: 584 QVKDVYATTYDTFGLYWPHIHHYIIIGILLMQVTMIGLFGLKSKPAASIFTIPLLLITLY 643
Query: 452 LTSTARCGF 478
+ F
Sbjct: 644 FNEHCKSRF 652
Score = 74.3 bits (181), Expect(2) = 8e-33
Identities = 37/67 (55%), Positives = 44/67 (65%)
Frame = +1
Query: 454 NEYCKMRFLPTFFNFSIQNAVENDERDAMNGLAECKSEAAIDAYLPPCLRPMNFEASTSI 633
NE+CK RFLPTF + IQ A+ENDE D + E E A DAY PCL+P++F STS
Sbjct: 645 NEHCKSRFLPTFHCYPIQEAMENDELDEKSDELEVNYETAADAYCLPCLQPLDFLLSTST 704
Query: 634 QPLVNST 654
P VNST
Sbjct: 705 LPRVNST 711
>ref|XP_004142485.1| PREDICTED: uncharacterized membrane protein YLR241W-like [Cucumis
sativus]
Length = 714
Score = 93.2 bits (230), Expect(2) = 7e-31
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 272 QIQDVYETVYDTGGLCWPYIHHYVIFAIFLMQITMIGLFGLKSKPSASISTIPLFVFTIL 451
Q++DVY T YDT GL WP+IHHY+I I LMQ+TMIGLFGLKSKP+ASI TIPL + T+
Sbjct: 584 QVKDVYATTYDTFGLYWPHIHHYIIIGILLMQVTMIGLFGLKSKPAASIFTIPLLLITLY 643
Query: 452 LTSTARCGF 478
+ F
Sbjct: 644 FNEHCKSRF 652
Score = 67.8 bits (164), Expect(2) = 7e-31
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1
Query: 454 NEYCKMRFLPTFFNFSIQNAVENDERDAMNGLAECKSEAAIDAYLPPCLRPMNFEASTSI 633
NE+CK RFLPTF + IQ A+ENDE D + E E A DAY PCL+P++F STS
Sbjct: 645 NEHCKSRFLPTFHCYPIQEAMENDELDEKSDELEVNYETAADAYCLPCLQPLDFLLSTST 704
Query: 634 QP 639
P
Sbjct: 705 LP 706
>ref|XP_002876256.1| hypothetical protein ARALYDRAFT_485854 [Arabidopsis lyrata subsp.
lyrata] gi|297322094|gb|EFH52515.1| hypothetical protein
ARALYDRAFT_485854 [Arabidopsis lyrata subsp. lyrata]
Length = 712
Score = 92.8 bits (229), Expect(2) = 7e-27
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 272 QIQDVYETVYDTGGLCWPYIHHYVIFAIFLMQITMIGLFGLKSKPSASISTIPLFVFTIL 451
Q++DVYET YDT G WP+IHHY+ +I LMQITM+GLFGLKSKPSA+I+T+PL + TI
Sbjct: 579 QMEDVYETTYDTCGRFWPFIHHYIFVSIILMQITMVGLFGLKSKPSAAIATVPLILITIA 638
Query: 452 LTSTARCGF 478
+ F
Sbjct: 639 YNEYCKIRF 647
Score = 54.7 bits (130), Expect(2) = 7e-27
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +1
Query: 454 NEYCKMRFLPTFFNFSIQNAVENDERDAMNGLAECKSEAAIDAY--LPPCL-RPMNFEAS 624
NEYCK+RFLP+F +F IQ AV+ DE D NG E A AY PCL R + EA
Sbjct: 640 NEYCKIRFLPSFKHFPIQTAVDIDEEDEKNGEMETHCVDAASAYNRHQPCLERVSSAEAP 699
Query: 625 TSI-QPLVNS 651
T++ QPL+ +
Sbjct: 700 TNLSQPLLGT 709
>ref|NP_001118837.1| Early-responsive to dehydration stress protein (ERD4) [Arabidopsis
thaliana] gi|332645723|gb|AEE79244.1| Early-responsive
to dehydration stress protein (ERD4) [Arabidopsis
thaliana]
Length = 712
Score = 92.8 bits (229), Expect(2) = 1e-26
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 272 QIQDVYETVYDTGGLCWPYIHHYVIFAIFLMQITMIGLFGLKSKPSASISTIPLFVFTIL 451
Q++DVYET YDT G WP+IHHY+ +I LMQITM+GLFGLKSKPSA+I+T+PL + TI
Sbjct: 579 QMEDVYETTYDTCGRFWPFIHHYIFVSIILMQITMVGLFGLKSKPSAAIATVPLILITIA 638
Query: 452 LTSTARCGF 478
+ F
Sbjct: 639 YNEYCKIRF 647
Score = 53.9 bits (128), Expect(2) = 1e-26
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +1
Query: 454 NEYCKMRFLPTFFNFSIQNAVENDERDAMNGLAECKSEAAIDAY--LPPCL-RPMNFEAS 624
NEYCK+RFLP+F +F IQ AVE DE D NG E A AY PCL R + E+
Sbjct: 640 NEYCKIRFLPSFKHFPIQTAVEIDEEDEKNGEMETHYVDAATAYNRHQPCLERVSSAESP 699
Query: 625 TSI-QPLVNS 651
T++ QPL+ +
Sbjct: 700 TNLSQPLLGT 709
>ref|NP_191015.2| Early-responsive to dehydration stress protein (ERD4) [Arabidopsis
thaliana] gi|332645722|gb|AEE79243.1| Early-responsive
to dehydration stress protein (ERD4) [Arabidopsis
thaliana]
Length = 617
Score = 92.8 bits (229), Expect(2) = 1e-26
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 272 QIQDVYETVYDTGGLCWPYIHHYVIFAIFLMQITMIGLFGLKSKPSASISTIPLFVFTIL 451
Q++DVYET YDT G WP+IHHY+ +I LMQITM+GLFGLKSKPSA+I+T+PL + TI
Sbjct: 484 QMEDVYETTYDTCGRFWPFIHHYIFVSIILMQITMVGLFGLKSKPSAAIATVPLILITIA 543
Query: 452 LTSTARCGF 478
+ F
Sbjct: 544 YNEYCKIRF 552
Score = 53.9 bits (128), Expect(2) = 1e-26
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +1
Query: 454 NEYCKMRFLPTFFNFSIQNAVENDERDAMNGLAECKSEAAIDAY--LPPCL-RPMNFEAS 624
NEYCK+RFLP+F +F IQ AVE DE D NG E A AY PCL R + E+
Sbjct: 545 NEYCKIRFLPSFKHFPIQTAVEIDEEDEKNGEMETHYVDAATAYNRHQPCLERVSSAESP 604
Query: 625 TSI-QPLVNS 651
T++ QPL+ +
Sbjct: 605 TNLSQPLLGT 614