BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021825
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337469.1| hypothetical protein POPTRDRAFT_793872 [Popu...    89   3e-16
ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...    88   8e-16
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...    87   2e-15
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    84   1e-14
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    84   1e-14

>ref|XP_002337469.1| hypothetical protein POPTRDRAFT_793872 [Populus trichocarpa]
           gi|222839420|gb|EEE77757.1| hypothetical protein
           POPTRDRAFT_793872 [Populus trichocarpa]
          Length = 137

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/74 (56%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +1

Query: 4   SKDATGNTV-EHNEDEGKD-CGHSFILKDDLGYVCRVCGVIQKSIDTIFDYQWGKVSKTT 177
           SKD   N   + N +E +D C HSF+LKDD+GYVCR+CGVI+K+IDTI + Q+ KV + T
Sbjct: 60  SKDVVENPQPDENMEEDEDYCDHSFVLKDDIGYVCRICGVIEKAIDTIIEIQFNKVKRNT 119

Query: 178 RTYMSESHSTKERE 219
           RTYMSES + K+R+
Sbjct: 120 RTYMSESRNAKDRD 133


>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
           max]
          Length = 1001

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   CSKDATGNTVEHNE-DEGKDCGHSFILKDDLGYVCRVCGVIQKSIDTIFDYQWGKVSKTT 177
           CSKD   N +   E  E +DC HSFILKDDLGYVCRVCG+I + I+TIF++Q+ K  ++T
Sbjct: 355 CSKDTYVNPLPDEEVKEDEDCDHSFILKDDLGYVCRVCGIIDRGIETIFEFQY-KAKRST 413

Query: 178 RTYMSESHSTKERED 222
           RTY S+S +TK + D
Sbjct: 414 RTYASDSRNTKGKAD 428


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   CSKDATGNTV-EHNEDEGKDCGHSFILKDDLGYVCRVCGVIQKSIDTIFDYQWGKVSKTT 177
           CSKD + +   E  E+E  +C HSF+LKDDLGYVCRVCGVI + I+TIF++Q+ KV ++T
Sbjct: 252 CSKDVSEDPEPEEEEEEDDNCDHSFVLKDDLGYVCRVCGVIDRKIETIFEFQY-KVKRST 310

Query: 178 RTYMSESHSTKERED 222
           RTY S+S ++K + D
Sbjct: 311 RTYASDSWNSKGKAD 325


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   CSKD---ATGNTVEHNEDEGKDCGHSFILKDDLGYVCRVCGVIQKSIDTIFDYQWGKVSK 171
           CSKD   A  ++      E  DC HSF+LKDDLGYVCR+CGVI + I+TIF++Q+ K  K
Sbjct: 265 CSKDLDAAVDSSSNQPTTEDVDCEHSFLLKDDLGYVCRICGVIDRGIETIFEFQYNKGKK 324

Query: 172 TTRTYMSESHS 204
           +TRTY+SES +
Sbjct: 325 STRTYISESRN 335


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   CSKD---ATGNTVEHNEDEGKDCGHSFILKDDLGYVCRVCGVIQKSIDTIFDYQWGKVSK 171
           CSKD   A  ++      E  DC HSF+LKDDLGYVCR+CGVI + I+TIF++Q+ K  K
Sbjct: 265 CSKDLDAAVDSSSNQPTTEDVDCEHSFLLKDDLGYVCRICGVIDRGIETIFEFQYNKGKK 324

Query: 172 TTRTYMSESHS 204
           +TRTY+SES +
Sbjct: 325 STRTYISESRN 335