BLASTX nr result

ID: Coptis23_contig00021818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021818
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053702.1| Os04g0589900 [Oryza sativa Japonica Group] g...    77   4e-12
gb|EAZ31806.1| hypothetical protein OsJ_15962 [Oryza sativa Japo...    77   4e-12
gb|EAY95349.1| hypothetical protein OsI_17180 [Oryza sativa Indi...    77   4e-12
gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [O...    73   8e-11
gb|ABG66282.1| AT-hook protein 1, putative, expressed [Oryza sat...    73   8e-11

>ref|NP_001053702.1| Os04g0589900 [Oryza sativa Japonica Group]
           gi|38346715|emb|CAE04865.2| OSJNBa0086O06.13 [Oryza
           sativa Japonica Group] gi|89572596|dbj|BAC78598.2|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|113565273|dbj|BAF15616.1| Os04g0589900 [Oryza sativa
           Japonica Group] gi|215697767|dbj|BAG91960.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 379

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = -3

Query: 490 RKAYIVSGTGAVSIATFFD-SXXXXXXTYEGYFHITSLRGSFLLHESGELR-RTSGLNIT 317
           R   I+S  GA+  AT    +      TYEG+F I SL GSFLL E G+ R RT GL++ 
Sbjct: 196 RTTCIISANGALCTATLRQPATSGGIVTYEGHFDILSLSGSFLLAEDGDTRSRTGGLSVA 255

Query: 316 LAGLDDRSFSGCVSGDLMAASSVQVSLSCYSHEEQINTTSHL--EPSSSP 173
           LAG D R   GCV+G LMAA+ VQV +  +  E +     HL  EP+S+P
Sbjct: 256 LAGSDGRIVGGCVAGMLMAATPVQVVVGSFIAEGKKGKEEHLKREPTSAP 305


>gb|EAZ31806.1| hypothetical protein OsJ_15962 [Oryza sativa Japonica Group]
          Length = 379

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = -3

Query: 490 RKAYIVSGTGAVSIATFFD-SXXXXXXTYEGYFHITSLRGSFLLHESGELR-RTSGLNIT 317
           R   I+S  GA+  AT    +      TYEG+F I SL GSFLL E G+ R RT GL++ 
Sbjct: 196 RTTCIISANGALCTATLRQPATSGGIVTYEGHFDILSLSGSFLLAEDGDTRSRTGGLSVA 255

Query: 316 LAGLDDRSFSGCVSGDLMAASSVQVSLSCYSHEEQINTTSHL--EPSSSP 173
           LAG D R   GCV+G LMAA+ VQV +  +  E +     HL  EP+S+P
Sbjct: 256 LAGSDGRIVGGCVAGMLMAATPVQVVVGSFIAEGKKGKEEHLKREPTSAP 305


>gb|EAY95349.1| hypothetical protein OsI_17180 [Oryza sativa Indica Group]
          Length = 379

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = -3

Query: 490 RKAYIVSGTGAVSIATFFD-SXXXXXXTYEGYFHITSLRGSFLLHESGELR-RTSGLNIT 317
           R   I+S  GA+  AT    +      TYEG+F I SL GSFLL E G+ R RT GL++ 
Sbjct: 196 RTTCIISANGALCTATLRQPATSGGIVTYEGHFDILSLSGSFLLAEDGDTRSRTGGLSVA 255

Query: 316 LAGLDDRSFSGCVSGDLMAASSVQVSLSCYSHEEQINTTSHL--EPSSSP 173
           LAG D R   GCV+G LMAA+ VQV +  +  E +     HL  EP+S+P
Sbjct: 256 LAGSDGRIVGGCVAGMLMAATPVQVVVGSFIAEGKKGKEEHLKREPTSAP 305


>gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [Oryza sativa Japonica Group]
           gi|110289621|gb|ABB48013.2| AT-hook protein 1, putative,
           expressed [Oryza sativa Japonica Group]
           gi|110289622|gb|ABB48012.2| AT-hook protein 1, putative,
           expressed [Oryza sativa Japonica Group]
           gi|125533038|gb|EAY79603.1| hypothetical protein
           OsI_34743 [Oryza sativa Indica Group]
          Length = 405

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
 Frame = -3

Query: 490 RKAYIVSGTGAVSIATFFD-SXXXXXXTYEGYFHITSLRGSFLLHESGELR-RTSGLNIT 317
           R   I+S  GA+S  T    +      TYEG F I SL GSFLL E G+ R RT GL++ 
Sbjct: 214 RTVCILSANGAISNVTLRQPATSGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVA 273

Query: 316 LAGLDDRSFSGCVSGDLMAASSVQVSLSCYSHEEQIN---TTSHLEPSSSP 173
           LAG D R   GCV+G LMAA+ VQV ++ +  E + +    T  +EP S+P
Sbjct: 274 LAGSDGRVLGGCVAGMLMAATPVQVVVASFIAEGKKSKPVETRKVEPMSAP 324


>gb|ABG66282.1| AT-hook protein 1, putative, expressed [Oryza sativa Japonica
           Group] gi|215765047|dbj|BAG86744.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 200

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
 Frame = -3

Query: 490 RKAYIVSGTGAVSIATFFD-SXXXXXXTYEGYFHITSLRGSFLLHESGELR-RTSGLNIT 317
           R   I+S  GA+S  T    +      TYEG F I SL GSFLL E G+ R RT GL++ 
Sbjct: 9   RTVCILSANGAISNVTLRQPATSGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVA 68

Query: 316 LAGLDDRSFSGCVSGDLMAASSVQVSLSCYSHEEQIN---TTSHLEPSSSP 173
           LAG D R   GCV+G LMAA+ VQV ++ +  E + +    T  +EP S+P
Sbjct: 69  LAGSDGRVLGGCVAGMLMAATPVQVVVASFIAEGKKSKPVETRKVEPMSAP 119


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