BLASTX nr result

ID: Coptis23_contig00021813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021813
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   119   1e-24
ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266...   110   4e-22
ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]   110   4e-22
ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805...   109   1e-21

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  119 bits (298), Expect = 1e-24
 Identities = 67/118 (56%), Positives = 78/118 (66%), Gaps = 7/118 (5%)
 Frame = +2

Query: 419 SGSICYQKDKQKECNKTMSRK-GKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXX 595
           +G I Y K+ +K   KTMSR+ G   +LDL+LNLSPPRA+   E                
Sbjct: 73  TGEIYYTKNTRK---KTMSRRNGNGPKLDLKLNLSPPRADPRVESPNRSATVSPTSPPSS 129

Query: 596 CVSSEHTD------ANSPEATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLQE 751
           CVSSE         +NSPEATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFL E
Sbjct: 130 CVSSELNQDDTLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 187


>ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266492 [Vitis vinifera]
          Length = 120

 Score =  110 bits (276), Expect = 4e-22
 Identities = 59/100 (59%), Positives = 68/100 (68%), Gaps = 6/100 (6%)
 Frame = +2

Query: 470 MSRKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXXCVSSEHTD------ANSP 631
           MSR+   + LDL+LNLSPPRAN+  E                CVSSE         +NSP
Sbjct: 1   MSRRNGPK-LDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSNSP 59

Query: 632 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLQE 751
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFL +
Sbjct: 60  EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 99


>ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|222855376|gb|EEE92923.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  110 bits (276), Expect = 4e-22
 Identities = 59/98 (60%), Positives = 65/98 (66%), Gaps = 6/98 (6%)
 Frame = +2

Query: 476 RKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXXCVSSE--HTDA----NSPEA 637
           R G   +LDL+LNLSPPR N   E                CVSSE  H DA    +SPEA
Sbjct: 4   RNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSERSHDDALRYSSSPEA 63

Query: 638 TSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLQE 751
           TSM+LVGCPRCLMYVML+E DPKCPKCKSTVLLDFL +
Sbjct: 64  TSMVLVGCPRCLMYVMLSENDPKCPKCKSTVLLDFLHD 101


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score =  110 bits (276), Expect = 4e-22
 Identities = 59/100 (59%), Positives = 68/100 (68%), Gaps = 6/100 (6%)
 Frame = +2

Query: 470 MSRKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXXCVSSEHTD------ANSP 631
           MSR+   + LDL+LNLSPPRAN+  E                CVSSE         +NSP
Sbjct: 162 MSRRNGPK-LDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSNSP 220

Query: 632 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLQE 751
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFL +
Sbjct: 221 EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 260


>ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805043 [Glycine max]
          Length = 109

 Score =  109 bits (272), Expect = 1e-21
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +2

Query: 470 MSRKGKRR-ELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXXCVSSEHTD-----ANSP 631
           MSR+ +   +LDL+LNLSPPRA++  E                CVSSE        +NSP
Sbjct: 1   MSRRNESGPKLDLKLNLSPPRADRRLESPTRSATASPTSPPSSCVSSELNQEDKSYSNSP 60

Query: 632 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLQE 751
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFL +
Sbjct: 61  EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 100


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