BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021808
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-li...   647   0.0  
ref|XP_002519473.1| conserved hypothetical protein [Ricinus comm...   545   e-152
ref|XP_002323788.1| predicted protein [Populus trichocarpa] gi|2...   542   e-152
dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza ...   524   e-146
gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japo...   524   e-146

>ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
          Length = 831

 Score =  647 bits (1668), Expect = 0.0
 Identities = 329/429 (76%), Positives = 368/429 (85%), Gaps = 1/429 (0%)
 Frame = +2

Query: 2    SNSALDEIVLRVLSTGIHDENGNVDKPKIVRIGLKPHHSVQAVSMDYQVEQKLSGMDNTT 181
            SNSALDEIVLR+L+TG+ DEN +   PKIVRIGLKPHHSV+AVSMDY VEQKLS M N+T
Sbjct: 383  SNSALDEIVLRLLNTGVRDENDHAYNPKIVRIGLKPHHSVRAVSMDYLVEQKLSSM-NST 441

Query: 182  ADARKRGATG-DRDSIRASVLDEAAIVXXXXXXXXXXXXXXXNHVFDVVIIDEAAQAVEP 358
            +D +K GA G DRDS+R+S+L EAAIV               N  FDVVIIDEAAQAVEP
Sbjct: 442  SDKQKHGAAGRDRDSVRSSILSEAAIVFSTLSFSGSSLFSKLNSGFDVVIIDEAAQAVEP 501

Query: 359  ATLVPLANGCKQVFLVGDPVQLPATVISPIAERFGYGMSLFTRLQKAGYPVQMLKTQYRM 538
            ATLVPLANGCKQVFLVGDPVQLPATVISPIAE+FGYGMSLF R Q+AGYPVQMLKTQYRM
Sbjct: 502  ATLVPLANGCKQVFLVGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRM 561

Query: 539  HPEIRYFPSREFYSEALEDGPDVKDQTERPWHGYHCFGPFVFFDITEGVESQPSGSGSWV 718
            HPEIR FPS+EFY EALEDGPDVKDQT R WH Y CFGPF FFDI EG ESQPSGSGSWV
Sbjct: 562  HPEIRSFPSKEFYDEALEDGPDVKDQTVRLWHDYRCFGPFCFFDIHEGKESQPSGSGSWV 621

Query: 719  NVDEVEFILLMYNKLVTNYPELKSSSRLAIISPYRHQVKLFRDRFRDTFGVESDKLVDIN 898
            NVDEVEF+LLMY+KLVT YPELKSSSRLAIISPYRHQVKLFR+RF+DTFGVESDK+VDIN
Sbjct: 622  NVDEVEFVLLMYHKLVTRYPELKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDIN 681

Query: 899  TVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARSSVLVVGSASTLKRDKH 1078
            TVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRAR+SVLVVGSASTLK+D+H
Sbjct: 682  TVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGSASTLKKDEH 741

Query: 1079 WANLVQSAEQRSCLFKVSRPYTSFFNDKNLKTLQVKDETMIDAVKSHPGETEDNGAMYGN 1258
            W NL++SAE+R+CL KVS+PYT+FF+D+NLK++  KD++M +  +   G   DN A   +
Sbjct: 742  WNNLLESAEKRNCLLKVSKPYTAFFSDENLKSMVAKDQSMPEDAEG--GMAVDNNAPIYS 799

Query: 1259 PVGEPEQGQ 1285
             +G+ EQGQ
Sbjct: 800  NLGDAEQGQ 808


>ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
            gi|223541336|gb|EEF42887.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 826

 Score =  545 bits (1404), Expect = e-152
 Identities = 284/429 (66%), Positives = 332/429 (77%), Gaps = 1/429 (0%)
 Frame = +2

Query: 2    SNSALDEIVLRVLSTGIHDENGNVDKPKIVRIGLKPHHSVQAVSMDYQVEQKLSGMDNTT 181
            SNSALDEIVLR+L  G+ DEN +   PKIVRIGLK HHSVQ+V MDY V+QK      + 
Sbjct: 385  SNSALDEIVLRLLRFGVRDENIHTYNPKIVRIGLKAHHSVQSVCMDYLVKQK---QGESA 441

Query: 182  ADARKRGATG-DRDSIRASVLDEAAIVXXXXXXXXXXXXXXXNHVFDVVIIDEAAQAVEP 358
            AD +K GA G D D+IR ++LDEA IV               NH FDVVIIDEAAQAVEP
Sbjct: 442  ADKQKHGAVGGDTDTIRTAILDEAVIVFSTLSFSGSAMFSKLNHGFDVVIIDEAAQAVEP 501

Query: 359  ATLVPLANGCKQVFLVGDPVQLPATVISPIAERFGYGMSLFTRLQKAGYPVQMLKTQYRM 538
            ATLVPLANGCKQVFLVGDP QLPATVISPIAE+FGY  SLF RLQ+AGYPV MLK QYRM
Sbjct: 502  ATLVPLANGCKQVFLVGDPKQLPATVISPIAEKFGYKTSLFERLQRAGYPVNMLKMQYRM 561

Query: 539  HPEIRYFPSREFYSEALEDGPDVKDQTERPWHGYHCFGPFVFFDITEGVESQPSGSGSWV 718
            HP+IR FPS+EFYSE L+D   + ++T+R WH Y CFGPF FFDI EG ESQPSGSGSWV
Sbjct: 562  HPQIRDFPSKEFYSEELQDAEKMDEKTKRDWHEYRCFGPFCFFDIHEGKESQPSGSGSWV 621

Query: 719  NVDEVEFILLMYNKLVTNYPELKSSSRLAIISPYRHQVKLFRDRFRDTFGVESDKLVDIN 898
            N DEV+F+L MY+KLVT +P+L+SSS+ AIISPYR+QVKL +DRFRD FG ES++ VDI 
Sbjct: 622  NNDEVDFVLHMYHKLVTMHPKLRSSSQFAIISPYRNQVKLLQDRFRDMFGQESEQFVDIQ 681

Query: 899  TVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARSSVLVVGSASTLKRDKH 1078
            TVDGFQGREKDVAIFSCVRA+KD+GIGFV+D RRMNVGITRA+S+VLVVGSASTLK D+ 
Sbjct: 682  TVDGFQGREKDVAIFSCVRANKDRGIGFVSDSRRMNVGITRAKSTVLVVGSASTLKSDES 741

Query: 1079 WANLVQSAEQRSCLFKVSRPYTSFFNDKNLKTLQVKDETMIDAVKSHPGETEDNGAMYGN 1258
            W  LV+SAEQR  LFKV +PY SFF+D NL++++  +   +        E +   AM GN
Sbjct: 742  WKRLVESAEQRGVLFKVDKPYDSFFSDSNLESMKTTEN--LPGRNDEDQENDMTVAMQGN 799

Query: 1259 PVGEPEQGQ 1285
             VG+ +QGQ
Sbjct: 800  -VGDADQGQ 807


>ref|XP_002323788.1| predicted protein [Populus trichocarpa] gi|222866790|gb|EEF03921.1|
            predicted protein [Populus trichocarpa]
          Length = 565

 Score =  542 bits (1397), Expect = e-152
 Identities = 278/414 (67%), Positives = 322/414 (77%), Gaps = 19/414 (4%)
 Frame = +2

Query: 2    SNSALDEIVLRVLSTGIHDENGNVDKPKIVRIGLKPHHSVQAVSMDYQVEQKLSGMDNTT 181
            SNSALDEIVLR+L TG+HDEN     PKIVRIGLK HHSVQ+V MD  V+QK    ++ +
Sbjct: 106  SNSALDEIVLRLLKTGVHDENVRSYNPKIVRIGLKAHHSVQSVCMDNLVKQKQG--ESAS 163

Query: 182  ADARKRGATGDRDSIRASVLDEAAIVXXXXXXXXXXXXXXXNHVFDVVIIDEAAQAVEPA 361
               + R A GD DSIRA++L+E+ IV               NH FDVVIIDEAAQAVEPA
Sbjct: 164  DKQKHRTAGGDTDSIRAAILEESVIVFSTLSFSGSALFSKLNHGFDVVIIDEAAQAVEPA 223

Query: 362  TLVPLANGCKQVFLV-------------------GDPVQLPATVISPIAERFGYGMSLFT 484
            TLVPL NGCKQVFLV                   GDPVQLPATVISP A +FGYG SLF 
Sbjct: 224  TLVPLVNGCKQVFLVSKIHTNIKRLLDNLTVLIVGDPVQLPATVISPTAGKFGYGTSLFE 283

Query: 485  RLQKAGYPVQMLKTQYRMHPEIRYFPSREFYSEALEDGPDVKDQTERPWHGYHCFGPFVF 664
            R Q+AGYPV MLK QYRMHPEIR FPS EFY+EAL+D  D++ +T R WH YHCFGPF F
Sbjct: 284  RFQRAGYPVNMLKMQYRMHPEIRSFPSSEFYAEALQDADDLERRTTRDWHQYHCFGPFCF 343

Query: 665  FDITEGVESQPSGSGSWVNVDEVEFILLMYNKLVTNYPELKSSSRLAIISPYRHQVKLFR 844
            FD+ EG ESQPSGSGSWVNVDEVEF+LL+Y+KLVT YPEL+SSS+ AIISPYRHQVKLF+
Sbjct: 344  FDVHEGKESQPSGSGSWVNVDEVEFVLLLYHKLVTMYPELRSSSQFAIISPYRHQVKLFQ 403

Query: 845  DRFRDTFGVESDKLVDINTVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRA 1024
            DRFRD FG ES K VDI TVDGFQGREKDVAIFSCVR++ D+ IGFV+D RRMNVGITRA
Sbjct: 404  DRFRDAFGQESKKFVDIQTVDGFQGREKDVAIFSCVRSNDDRRIGFVSDARRMNVGITRA 463

Query: 1025 RSSVLVVGSASTLKRDKHWANLVQSAEQRSCLFKVSRPYTSFFNDKNLKTLQVK 1186
            +S+VLVVGSASTL+ D+HW NLV+SAE+R+ LFKVS+PY+SFF+D NL +++V+
Sbjct: 464  KSAVLVVGSASTLRNDEHWNNLVESAEKRNVLFKVSKPYSSFFSDSNLNSMKVE 517


>dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
            Group]
          Length = 788

 Score =  524 bits (1350), Expect = e-146
 Identities = 265/395 (67%), Positives = 314/395 (79%)
 Frame = +2

Query: 2    SNSALDEIVLRVLSTGIHDENGNVDKPKIVRIGLKPHHSVQAVSMDYQVEQKLSGMDNTT 181
            SNSALDEIVLRVL TGI DEN N   PKIVRIGLK HHSV+AVSMDY ++QKLSG+D ++
Sbjct: 347  SNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSS 406

Query: 182  ADARKRGATGDRDSIRASVLDEAAIVXXXXXXXXXXXXXXXNHVFDVVIIDEAAQAVEPA 361
             D  +RGA G+ D IR+S+LDEAAIV                  FDVVIIDEAAQAVEPA
Sbjct: 407  -DGGRRGA-GEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPA 464

Query: 362  TLVPLANGCKQVFLVGDPVQLPATVISPIAERFGYGMSLFTRLQKAGYPVQMLKTQYRMH 541
            TL+PL +GCKQVFLVGDPVQLPATVIS  A++ GYG SLF R Q AG+PVQMLK QYRMH
Sbjct: 465  TLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMH 524

Query: 542  PEIRYFPSREFYSEALEDGPDVKDQTERPWHGYHCFGPFVFFDITEGVESQPSGSGSWVN 721
            PEI  FPS+EFY   LEDG  +  +  RPWH Y CFGPF FFD+ +G ESQPSGSGSWVN
Sbjct: 525  PEISIFPSKEFYEGVLEDGEGLSKK--RPWHSYSCFGPFCFFDV-DGTESQPSGSGSWVN 581

Query: 722  VDEVEFILLMYNKLVTNYPELKSSSRLAIISPYRHQVKLFRDRFRDTFGVESDKLVDINT 901
             DEVEFI L+Y+++   YPELKSSS++A+ISPYRHQVKL +D FR TFG +S +++D+NT
Sbjct: 582  EDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNT 641

Query: 902  VDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARSSVLVVGSASTLKRDKHW 1081
            VDGFQGREK+V IFSCVR +K++ IGFV+DFRRMNV ITRARS+VLVVGSASTLK DKHW
Sbjct: 642  VDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHW 701

Query: 1082 ANLVQSAEQRSCLFKVSRPYTSFFNDKNLKTLQVK 1186
             NLV+SA++R   F+V +P+T+FF D  LKT++V+
Sbjct: 702  NNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVE 736


>gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
          Length = 848

 Score =  524 bits (1350), Expect = e-146
 Identities = 265/395 (67%), Positives = 314/395 (79%)
 Frame = +2

Query: 2    SNSALDEIVLRVLSTGIHDENGNVDKPKIVRIGLKPHHSVQAVSMDYQVEQKLSGMDNTT 181
            SNSALDEIVLRVL TGI DEN N   PKIVRIGLK HHSV+AVSMDY ++QKLSG+D ++
Sbjct: 407  SNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSS 466

Query: 182  ADARKRGATGDRDSIRASVLDEAAIVXXXXXXXXXXXXXXXNHVFDVVIIDEAAQAVEPA 361
             D  +RGA G+ D IR+S+LDEAAIV                  FDVVIIDEAAQAVEPA
Sbjct: 467  -DGGRRGA-GEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPA 524

Query: 362  TLVPLANGCKQVFLVGDPVQLPATVISPIAERFGYGMSLFTRLQKAGYPVQMLKTQYRMH 541
            TL+PL +GCKQVFLVGDPVQLPATVIS  A++ GYG SLF R Q AG+PVQMLK QYRMH
Sbjct: 525  TLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMH 584

Query: 542  PEIRYFPSREFYSEALEDGPDVKDQTERPWHGYHCFGPFVFFDITEGVESQPSGSGSWVN 721
            PEI  FPS+EFY   LEDG  +  +  RPWH Y CFGPF FFD+ +G ESQPSGSGSWVN
Sbjct: 585  PEISIFPSKEFYEGVLEDGEGLSKK--RPWHSYSCFGPFCFFDV-DGTESQPSGSGSWVN 641

Query: 722  VDEVEFILLMYNKLVTNYPELKSSSRLAIISPYRHQVKLFRDRFRDTFGVESDKLVDINT 901
             DEVEFI L+Y+++   YPELKSSS++A+ISPYRHQVKL +D FR TFG +S +++D+NT
Sbjct: 642  EDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNT 701

Query: 902  VDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARSSVLVVGSASTLKRDKHW 1081
            VDGFQGREK+V IFSCVR +K++ IGFV+DFRRMNV ITRARS+VLVVGSASTLK DKHW
Sbjct: 702  VDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHW 761

Query: 1082 ANLVQSAEQRSCLFKVSRPYTSFFNDKNLKTLQVK 1186
             NLV+SA++R   F+V +P+T+FF D  LKT++V+
Sbjct: 762  NNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVE 796