BLASTX nr result

ID: Coptis23_contig00021805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021805
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   5e-07
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-06
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-06
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-06

>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/116 (27%), Positives = 53/116 (45%)
 Frame = -2

Query: 410 RLDRALASPD*ITIFPHAHVQTVANATSDHIYLFINFDKTEEKSPRPFKFFDMWLTNDAC 231
           +LDR   +P+ +T +P   +  +    SDH  L +N        P+PFKF + WL++  C
Sbjct: 193 KLDRCFVNPEWLTHYPTLKLSLLNRGLSDHCPLLLN-SSVRNWGPKPFKFQNCWLSDPRC 251

Query: 230 KPXXXXXXXXXNDDMPDSAFLHNLSNTRKDLTSWNKFVFGNIFTKIKVTQKKLDKV 63
                               +  L   +KDL  WN+ VFGNI   IK  + +++++
Sbjct: 252 M----RLVKDTWQKSSPMGLVQKLKTVKKDLKDWNEKVFGNIEANIKQLEHEINQL 303


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/141 (24%), Positives = 64/141 (45%)
 Frame = -2

Query: 425 DHVLERLDRALASPD*ITIFPHAHVQTVANATSDHIYLFINFDKTEEKSPRPFKFFDMWL 246
           +++ ERLDR +AS   + +FPHA ++     +SDH  + + +    +    PF+F  MW 
Sbjct: 195 NNIHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYLANNKSKAPPFRFEKMWC 254

Query: 245 TNDACKPXXXXXXXXXNDDMPDSAFLHNLSNTRKDLTSWNKFVFGNIFTKIKVTQKKLDK 66
           T                       F+      + +   WNK  FGNIF +++   ++L++
Sbjct: 255 TRKDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQFGNIFRQLRQVDERLEE 314

Query: 65  VLSRPFTIENYNEAKALKETL 3
           +  R   I++ N +   ++ L
Sbjct: 315 I-QRNLLIDHNNTSLKTQQEL 334


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/114 (28%), Positives = 53/114 (46%)
 Frame = -2

Query: 407 LDRALASPD*ITIFPHAHVQTVANATSDHIYLFINFDKTEEKSPRPFKFFDMWLTNDACK 228
           LDR L +P+ I  FP   +  +    SDH  L  N   T+   P+PF+F + WLT+  C 
Sbjct: 194 LDRLLLNPEWINEFPSMRLSLLQRGLSDHCPLLTNIH-TQNWGPKPFRFQNCWLTDPHCL 252

Query: 227 PXXXXXXXXXNDDMPDSAFLHNLSNTRKDLTSWNKFVFGNIFTKIKVTQKKLDK 66
                       +  +   +  L   +  L +WN+  FG+I T IK+ + ++ K
Sbjct: 253 EIVNKTWL----ESTNMPMIDKLRRVKIRLKAWNRDEFGHIDTNIKIMEDEIQK 302


>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = -2

Query: 407 LDRALASPD*ITIFPHAHVQTVANATSDHIYLFINFDKTEEKSPRPFKFFDMWLTNDACK 228
           LDR   +P+ IT  P+  V  +    SDH  L ++ +K  +  P+PF+F + WL++  C 
Sbjct: 194 LDRLFVNPEWITNLPNLRVSLLQRGLSDHCPLLVH-NKELDWGPKPFRFQNCWLSDPECL 252

Query: 227 PXXXXXXXXXNDDMPDSAFLHN---LSNTRKDLTSWNKFVFGNIFTKIKVTQKKL 72
                          D+  LH    L   +K L SWN   FGNI +KIK  + ++
Sbjct: 253 KIVKAVWQ-------DAEALHTIGKLKEVKKRLKSWNLTEFGNIDSKIKKFESEI 300


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/116 (26%), Positives = 50/116 (43%)
 Frame = -2

Query: 410 RLDRALASPD*ITIFPHAHVQTVANATSDHIYLFINFDKTEEKSPRPFKFFDMWLTNDAC 231
           +LDR    P  + +FP   +  +    SDH  + +   K +   PRPF+F D WL++  C
Sbjct: 193 KLDRMFIHPQWLDLFPTLQISLLKRTLSDHCPILVQ-TKLKNWGPRPFRFIDAWLSHPGC 251

Query: 230 KPXXXXXXXXXNDDMPDSAFLHNLSNTRKDLTSWNKFVFGNIFTKIKVTQKKLDKV 63
                        +  D +F   L   +  L  WN   FG I  KI+  + K+ ++
Sbjct: 252 LKLISKTWL----EAHDCSFSEKLKKVKSSLLKWNAEEFGCIDEKIQSLENKIQEM 303


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