BLASTX nr result

ID: Coptis23_contig00021793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021793
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23596.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   189   2e-46
emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]   189   2e-46
ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate...   189   3e-46
emb|CBI23601.3| unnamed protein product [Vitis vinifera]              188   3e-46

>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/166 (53%), Positives = 121/166 (72%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL+EMIKG+ RF +QD EVKK +YTRD+++K+ + SNFDLF++ AA W+DS     +P 
Sbjct: 98  SVLEEMIKGIRRFNEQDTEVKKEFYTRDSSKKVKFVSNFDLFQAPAATWKDSFSCIINP- 156

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               +  D  ++PAVCRDII+E+ KQ+ +L +TL +L +E+LGL ++HLK+M C E   L
Sbjct: 157 ----NPPDPTDMPAVCRDIIMEYSKQVKMLANTLFELVAEALGLNSNHLKDMECAEGLFL 212

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
           V HYYPACPEPEL +G   HTDP F T+LLQ+ + GLQV H+  WV
Sbjct: 213 VSHYYPACPEPELTMGTKTHTDPTFLTVLLQDQVGGLQVLHEKQWV 258


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/166 (54%), Positives = 118/166 (71%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL+EM+ GV RFY+QD EVKK +YTRD  RK+ YNSNFDL+ SKAA WRD+     +P 
Sbjct: 102 SVLEEMMDGVHRFYEQDNEVKKEFYTRDLTRKVIYNSNFDLYVSKAANWRDTFYCLMAP- 160

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               H  +  ELPA CRDI++E+ +Q+  LG  L +L SE++GL  +HLK+M+C E   +
Sbjct: 161 ----HPLNPQELPATCRDILMEYKEQVMRLGLKLLELMSEAIGLNPNHLKDMDCAEGLAI 216

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
           + HYYPACP+PEL +G  KH+D  F TILLQ+ + GLQV HQD WV
Sbjct: 217 LCHYYPACPQPELTMGTTKHSDNDFLTILLQDQIGGLQVLHQDQWV 262


>emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]
          Length = 373

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/166 (54%), Positives = 121/166 (72%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL++MI G+ RF++QD E KK YY+RD+ +K+ +NSNFDL++++ A WRDSL    +P 
Sbjct: 111 SVLNDMIDGIRRFHEQDAETKKEYYSRDSQKKVRFNSNFDLYQARMANWRDSLACVMAP- 169

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               +    ++LPAVCRDI++E+ +Q+  LG TL +L SE+LGL  +HLK+M C E   L
Sbjct: 170 ----NPPLPEQLPAVCRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDMECAEGLFL 225

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
           + HYYPACPEPEL LG + HTD  FFTILLQ+ M GLQV H+D WV
Sbjct: 226 LGHYYPACPEPELTLGTSSHTDSDFFTILLQDQMGGLQVLHEDQWV 271


>ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 684

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/166 (54%), Positives = 120/166 (72%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL++MI G+ RF++QD E KK YY+RD+  K+ ++SNFDL++++ A WRDSL    +P 
Sbjct: 422 SVLNDMIDGIRRFHEQDAETKKEYYSRDSQNKVRFSSNFDLYQARTANWRDSLSCVMAP- 480

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               +    ++LPAVCRDI++E+  Q+  LG TL +L SE+LGL  +HLK+M C E   L
Sbjct: 481 ----NPPLPEQLPAVCRDIVMEYSGQVMKLGLTLFELLSEALGLNPNHLKDMECAEGLFL 536

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
           + HYYPACPEPEL LG + HTDP FFTILLQ+ M GLQV H+D WV
Sbjct: 537 LGHYYPACPEPELTLGTSSHTDPDFFTILLQDQMGGLQVLHEDQWV 582



 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/166 (54%), Positives = 119/166 (71%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL++MI G+ RF++QD E KK YY+RD+ +K+ + SNFDL++++ A WRDSL    +P 
Sbjct: 111 SVLNDMIDGIRRFHEQDAETKKEYYSRDSQKKVRFISNFDLYQARMANWRDSLSCVMAP- 169

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               +    ++LPAVCRDI++E+  Q+  LG TL +L SE+LGL  +HLK+M C E   L
Sbjct: 170 ----NPPLPEQLPAVCRDIVMEYSGQVMKLGLTLFELLSEALGLNPNHLKDMECAEGLFL 225

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
             HYYPACPEPEL LG + HTDP FFTILLQ+ M GLQV H+D WV
Sbjct: 226 SGHYYPACPEPELTLGTSSHTDPDFFTILLQDQMGGLQVLHEDQWV 271


>emb|CBI23601.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/166 (54%), Positives = 120/166 (72%)
 Frame = +2

Query: 2   SVLDEMIKGVIRFYDQDVEVKKRYYTRDTNRKLYYNSNFDLFKSKAAQWRDSLLYETSPA 181
           SVL++MI G+ RF++QD E KK YY+RD  +K+ +NSNFDL++++ A WRDSL    +P 
Sbjct: 84  SVLNDMIDGIRRFHEQDAETKKEYYSRDFQKKVRFNSNFDLYQARMANWRDSLACVMAP- 142

Query: 182 DLSEHSKDHDELPAVCRDIIIEFGKQLAILGDTLSQLFSESLGLKADHLKNMNCGEACTL 361
               +    ++LPAVCRDI++E+ +Q+  LG TL +L SE+LGL  +HLK+M C E   L
Sbjct: 143 ----NPPLPEQLPAVCRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDMECAEGLFL 198

Query: 362 VFHYYPACPEPELVLGNAKHTDPVFFTILLQNDMDGLQVRHQDHWV 499
           + HYYPACPEPEL LG + HTD  FFTILLQ+ M GLQV H+D WV
Sbjct: 199 LGHYYPACPEPELTLGTSSHTDSDFFTILLQDQMGGLQVLHEDQWV 244


Top