BLASTX nr result

ID: Coptis23_contig00021791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021791
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781...    86   4e-22
ref|XP_004159073.1| PREDICTED: uncharacterized protein LOC101226...    90   3e-21
ref|XP_002314724.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-20
ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-20
emb|CBI34951.3| unnamed protein product [Vitis vinifera]              100   1e-18

>ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781836 [Glycine max]
          Length = 493

 Score = 86.3 bits (212), Expect(2) = 4e-22
 Identities = 40/74 (54%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
 Frame = +1

Query: 340 GEAILNTGAALVEIVAGLF-GFKRKSRSHQFQHQ--YRKQQRHPNGWPQQDNFVIPDEDE 510
           G+ + NTGA++VEI+ GLF  F+RKS  +QFQ Q   ++ Q+  N WP Q++FVIPDED+
Sbjct: 314 GKLLANTGASMVEIIGGLFPSFRRKSLRYQFQRQPLIQQPQKQVNAWPVQESFVIPDEDQ 373

Query: 511 PPSIEAKTPTPKKT 552
           PPSI+ + PTP+KT
Sbjct: 374 PPSIDTRAPTPRKT 387



 Score = 46.2 bits (108), Expect(2) = 4e-22
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = +2

Query: 539 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGDS*KQRQQKLQ*H 667
           P+K + FM++D EK   +RQSRA  +GWDGD  +Q+QQ+ + H
Sbjct: 384 PRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDLQQQQQQQQKHH 426


>ref|XP_004159073.1| PREDICTED: uncharacterized protein LOC101226879 [Cucumis sativus]
          Length = 516

 Score = 89.7 bits (221), Expect(2) = 3e-21
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +1

Query: 340 GEAILNTGAALVEIVAGLF-GFKRKSRSHQFQHQYRKQQRHPNGWPQQDNFVIPDEDEPP 516
           G   +N+G+++ +I  GL  GF+RK  +HQ   Q++   RHPN WP Q++FVIPDEDEPP
Sbjct: 321 GRLFVNSGSSMADIFGGLLSGFRRKPLNHQIHQQFQPVNRHPNAWPLQESFVIPDEDEPP 380

Query: 517 SIEAKTPTPKKT 552
           SIE KTPT KKT
Sbjct: 381 SIETKTPTIKKT 392



 Score = 39.7 bits (91), Expect(2) = 3e-21
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = +2

Query: 542 QKRHVFMAQDPEKTHHVRQSRAPCNGWDGDS*KQRQQKLQ*HY*SISNIIHPVHK 706
           +K + FM QD +++H  + +R+  +GWDG+  +Q+QQ+   H+    +I H  H+
Sbjct: 390 KKTYPFMTQDLDRSHQFKPNRSYFSGWDGEFHQQQQQQQIQHHHQQQHIQHHHHQ 444


>ref|XP_002314724.1| predicted protein [Populus trichocarpa] gi|222863764|gb|EEF00895.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 73.2 bits (178), Expect(2) = 4e-20
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +1

Query: 340 GEAILNTGAALVEIVAGLFGFKRKSRSHQFQHQYRKQQRHPNGWPQQDNFVIPDEDEPPS 519
           G+  +NT A++ EI+ G+    RK   +   +QY+  Q+    WP QD+FVIPDEDEPPS
Sbjct: 319 GKLFINTWASIAEILGGIVPSFRKKPPN---YQYQNYQQQSTSWPVQDSFVIPDEDEPPS 375

Query: 520 IEAKTPTPKKT 552
            E +TPTP+KT
Sbjct: 376 TETRTPTPRKT 386



 Score = 52.8 bits (125), Expect(2) = 4e-20
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = +2

Query: 539 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGDS*KQRQQKLQ*HY*SISNIIHPVHKHS 712
           P+K + FM++D EK H  RQSR+  +GWDGD  +Q+QQK Q H+   S+  H  ++ S
Sbjct: 383 PRKTYPFMSKDTEKMHQWRQSRSIYSGWDGDFQQQQQQKQQYHHRYQSSTPHTYYEQS 440


>ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|222852333|gb|EEE89880.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 82.4 bits (202), Expect(2) = 5e-20
 Identities = 38/75 (50%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
 Frame = +1

Query: 340 GEAILNTGAALVEIVAGLF-GFKRKSRSHQFQHQYRKQQRHP---NGWPQQDNFVIPDED 507
           G+  +NTGA+++EI  G+   F++K  S+Q+Q+  ++Q +H    + WP QD+FVIPDED
Sbjct: 317 GKLFINTGASVMEIFGGIVPSFRKKPVSYQYQNYQQQQYQHQKQLSSWPVQDSFVIPDED 376

Query: 508 EPPSIEAKTPTPKKT 552
           EPPSIE++TPTP+KT
Sbjct: 377 EPPSIESRTPTPRKT 391



 Score = 43.1 bits (100), Expect(2) = 5e-20
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +2

Query: 539 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGDS*KQRQQKLQ*HY*SISNIIHPVHKHS 712
           P+K + FM++D EK H  RQ R+  +GWDGD    +QQ+ Q H+   S+  H  ++ S
Sbjct: 388 PRKTYPFMSKDTEKMHQWRQGRSIYSGWDGD---LQQQQHQHHHRYQSSTPHTYYEQS 442


>emb|CBI34951.3| unnamed protein product [Vitis vinifera]
          Length = 811

 Score =  100 bits (249), Expect = 1e-18
 Identities = 58/137 (42%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
 Frame = +1

Query: 340 GEAILNTGAALVEIVAGLFGFKRKSRSHQ-FQHQYRKQQRHPNGWPQQDNFVIPDEDEPP 516
           G   LNTG+ L EI  GLF   RK   HQ  Q QY +   H NGWP Q+++VIPDEDEPP
Sbjct: 317 GRLFLNTGSTLAEIFGGLFSGSRKKPPHQQIQQQYGQPNVHSNGWPMQESYVIPDEDEPP 376

Query: 517 SIEAKTPTPKKTCVHGAGS*KDPPCPTKSCSLQRLGW-GFLEXXXXXXXXXLLEYQQ--- 684
           SIE++ PTPKKT        +      +S +    GW G  +           +YQQ   
Sbjct: 377 SIESRAPTPKKTYPFMTPEMEKTHHFRQSRTFYSNGWDGNYQQLQQKQIQQKQQYQQHHQ 436

Query: 685 -HYSSSPQTFCVKCCES 732
            HYSS+PQT+  + CE+
Sbjct: 437 KHYSSNPQTYYEQSCET 453


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