BLASTX nr result

ID: Coptis23_contig00021786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021786
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39759.3| unnamed protein product [Vitis vinifera]              483   e-134
ref|XP_002270063.1| PREDICTED: uncharacterized protein LOC100258...   483   e-134
ref|XP_002522783.1| conserved hypothetical protein [Ricinus comm...   476   e-132
ref|XP_002298877.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
gb|AAL24198.1| AT4g26620/T15N24_70 [Arabidopsis thaliana] gi|273...   446   e-123

>emb|CBI39759.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/403 (61%), Positives = 293/403 (72%), Gaps = 3/403 (0%)
 Frame = -3

Query: 1442 ETDNYLMTNTGS-NSASGSFQNNENGFLYYXXXXXXXXXXXXXXSDVEFGFLRPELVRRQ 1266
            E D++L+       SASGSFQN   G L                SD EFGF RP+   RQ
Sbjct: 35   EGDSFLLEPASQIGSASGSFQNE--GLL----------SGGDGTSDAEFGFSRPDF--RQ 80

Query: 1265 NNPPLVGTVEIYNRHIFLCYKNPKVWPPHVEAAEFDRLPRXXXXXXXXXXAEINRMTRLT 1086
            +  PL GTV++Y+RH+FLCYK+P+VWPP +EAAEFDRLPR          +E+ + TRLT
Sbjct: 81   S--PLAGTVQLYDRHVFLCYKHPQVWPPRIEAAEFDRLPRLLSAALMARKSEMKKQTRLT 138

Query: 1085 ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVF 906
            ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW P TPE L GS +F
Sbjct: 139  ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIF 198

Query: 905  VCSHGSRDRRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVN 726
            VCSHGSRDRRCGVCGPA+V RF EEI++HGLQG+VSVSPCSHIGGHKYAGNVIIF  +++
Sbjct: 199  VCSHGSRDRRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNID 258

Query: 725  GEVTGHWYGYVTPDDVPILLEQHIGKGEIIDRLWRGQMGLSEDDQKKAQELRLQLSSETG 546
            G+V+GHWYGYVTPDDVPILLEQHI KGEI+  LWRGQMGLSE++Q K+QELR+QL+  TG
Sbjct: 259  GKVSGHWYGYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTG 318

Query: 545  MEKGTKVSI--QTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXVDRKEP 372
              K TK ++  QT E       +Q+EV  CCQ   N+ CCQN V +         +R+  
Sbjct: 319  DGKPTKETLQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLS--GKMEKLFEREAK 376

Query: 371  LAAAGRNTSGKQINGTIKGRGACTRKVCAMPTWFESWEREDTY 243
            +    + +S   I+ +   + ACTRKVCAMPTWFESWEREDTY
Sbjct: 377  VTPEKKKSSKMTISRSSSNKSACTRKVCAMPTWFESWEREDTY 419


>ref|XP_002270063.1| PREDICTED: uncharacterized protein LOC100258311 [Vitis vinifera]
          Length = 432

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/403 (61%), Positives = 293/403 (72%), Gaps = 3/403 (0%)
 Frame = -3

Query: 1442 ETDNYLMTNTGS-NSASGSFQNNENGFLYYXXXXXXXXXXXXXXSDVEFGFLRPELVRRQ 1266
            E D++L+       SASGSFQN   G L                SD EFGF RP+   RQ
Sbjct: 25   EGDSFLLEPASQIGSASGSFQNE--GLL----------SGGDGTSDAEFGFSRPDF--RQ 70

Query: 1265 NNPPLVGTVEIYNRHIFLCYKNPKVWPPHVEAAEFDRLPRXXXXXXXXXXAEINRMTRLT 1086
            +  PL GTV++Y+RH+FLCYK+P+VWPP +EAAEFDRLPR          +E+ + TRLT
Sbjct: 71   S--PLAGTVQLYDRHVFLCYKHPQVWPPRIEAAEFDRLPRLLSAALMARKSEMKKQTRLT 128

Query: 1085 ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVF 906
            ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEW P TPE L GS +F
Sbjct: 129  ICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWQPVTPEKLIGSCIF 188

Query: 905  VCSHGSRDRRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVN 726
            VCSHGSRDRRCGVCGPA+V RF EEI++HGLQG+VSVSPCSHIGGHKYAGNVIIF  +++
Sbjct: 189  VCSHGSRDRRCGVCGPAVVARFKEEIESHGLQGKVSVSPCSHIGGHKYAGNVIIFGSNID 248

Query: 725  GEVTGHWYGYVTPDDVPILLEQHIGKGEIIDRLWRGQMGLSEDDQKKAQELRLQLSSETG 546
            G+V+GHWYGYVTPDDVPILLEQHI KGEI+  LWRGQMGLSE++Q K+QELR+QL+  TG
Sbjct: 249  GKVSGHWYGYVTPDDVPILLEQHIEKGEIVYGLWRGQMGLSEEEQTKSQELRVQLNGGTG 308

Query: 545  MEKGTKVSI--QTFEAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXVDRKEP 372
              K TK ++  QT E       +Q+EV  CCQ   N+ CCQN V +         +R+  
Sbjct: 309  DGKPTKETLQTQTNEMDTAACGSQIEVMACCQENGNSSCCQNPVLS--GKMEKLFEREAK 366

Query: 371  LAAAGRNTSGKQINGTIKGRGACTRKVCAMPTWFESWEREDTY 243
            +    + +S   I+ +   + ACTRKVCAMPTWFESWEREDTY
Sbjct: 367  VTPEKKKSSKMTISRSSSNKSACTRKVCAMPTWFESWEREDTY 409


>ref|XP_002522783.1| conserved hypothetical protein [Ricinus communis]
            gi|223538021|gb|EEF39634.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 446

 Score =  476 bits (1226), Expect = e-132
 Identities = 240/389 (61%), Positives = 278/389 (71%), Gaps = 2/389 (0%)
 Frame = -3

Query: 1403 SASGSFQNNENGFLYYXXXXXXXXXXXXXXSDVEFGFLRPELVRRQNNPPLVGTVEIYNR 1224
            SAS SFQN+  GFL                SD+EFGF RPE   RQN  PL GTV+ Y R
Sbjct: 49   SASNSFQNDA-GFL---------TESASSSSDIEFGFSRPEF--RQN--PLAGTVQFYQR 94

Query: 1223 HIFLCYKNPKVWPPHVEAAEFDRLPRXXXXXXXXXXAEINRMTRLTICEGHDGTETSNGD 1044
            H+FLCYKNP VWPP VEAAEFDRLPR           ++ + TRLTICEGHDGTETSNGD
Sbjct: 95   HVFLCYKNPSVWPPRVEAAEFDRLPRLLSAAVLARKGDMKKETRLTICEGHDGTETSNGD 154

Query: 1043 VLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCSHGSRDRRCGVC 864
            VLIFPDM RYRRLTHFDVDTFVEEVLVK+GEW PGTPE LKGSYVFVC HGSRDRRCG+C
Sbjct: 155  VLIFPDMTRYRRLTHFDVDTFVEEVLVKEGEWLPGTPETLKGSYVFVCCHGSRDRRCGLC 214

Query: 863  GPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEVTGHWYGYVTPD 684
            GPA+V +F EEI+ HG QG+VSVSPCSHIGGHKYAGNVIIF   +NG +TGHWYGYVTPD
Sbjct: 215  GPAVVRKFKEEIELHGFQGKVSVSPCSHIGGHKYAGNVIIFGSSMNGLITGHWYGYVTPD 274

Query: 683  DVPILLEQHIGKGEIIDRLWRGQMGLSEDDQKKAQELRLQLSSETGMEKGTK--VSIQTF 510
            DVPILL+QHI KGEI+D+LWRGQMGLSE++Q K+QELRLQL+ ET + +  K     Q  
Sbjct: 275  DVPILLDQHIEKGEIVDQLWRGQMGLSEEEQIKSQELRLQLNGETDVTRNIKELTQSQED 334

Query: 509  EAGHPGNCNQVEVAGCCQGIANTICCQNSVSAXXXXXXXXVDRKEPLAAAGRNTSGKQIN 330
            EA +    + VE   CCQ    + CCQ  VS          ++   ++   + +S + ++
Sbjct: 335  EASNAAIRSDVEFMACCQQNGKSSCCQYPVSKHKEENLDANNKGVKVSPEKKKSSKRLLS 394

Query: 329  GTIKGRGACTRKVCAMPTWFESWEREDTY 243
                G+G  TR+VCAMPTW ESWEREDTY
Sbjct: 395  RINSGKGMSTRRVCAMPTWLESWEREDTY 423


>ref|XP_002298877.1| predicted protein [Populus trichocarpa] gi|222846135|gb|EEE83682.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  461 bits (1185), Expect = e-127
 Identities = 225/357 (63%), Positives = 263/357 (73%), Gaps = 1/357 (0%)
 Frame = -3

Query: 1310 DVEFGFLRPELVRRQNNPPLVGTVEIYNRHIFLCYKNPKVWPPHVEAAEFDRLPRXXXXX 1131
            D EFGF RP+   RQ+  PL GTV++Y+RH+FLCYKNP VWP  +EAAEFDRLPR     
Sbjct: 65   DAEFGFSRPDF--RQS--PLAGTVQLYHRHVFLCYKNPSVWPARIEAAEFDRLPRLLSAA 120

Query: 1130 XXXXXAEINRMTRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGE 951
                  ++   TRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGE
Sbjct: 121  VMARKGDMKNETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGE 180

Query: 950  WHPGTPEALKGSYVFVCSHGSRDRRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGG 771
            W PGTPE LKGSYVFVCSHGSRDRRCGVCGPALV+RF EEI+ HGLQG+VSVSPCSHIGG
Sbjct: 181  WLPGTPEKLKGSYVFVCSHGSRDRRCGVCGPALVSRFEEEIELHGLQGKVSVSPCSHIGG 240

Query: 770  HKYAGNVIIFCRDVNGEVTGHWYGYVTPDDVPILLEQHIGKGEIIDRLWRGQMGLSEDDQ 591
            HKYAGNVII      G VTGHWYGYVTPDD+ ILLEQHIGKGEI+DRLWRGQMGLSE++Q
Sbjct: 241  HKYAGNVIILGSSFKGAVTGHWYGYVTPDDIQILLEQHIGKGEIVDRLWRGQMGLSEEEQ 300

Query: 590  KKAQELRLQLSSETGMEKGTKVSIQTFEAGHPGNC-NQVEVAGCCQGIANTICCQNSVSA 414
             K+ ELRLQ +  T  E   +++ +  +  +  +  ++V   GCCQ   ++ CCQN V  
Sbjct: 301  IKSHELRLQQNGGT-TENSKEITQRPVDKSNTSSSRSEVVSTGCCQQNGSSSCCQNPVLP 359

Query: 413  XXXXXXXXVDRKEPLAAAGRNTSGKQINGTIKGRGACTRKVCAMPTWFESWEREDTY 243
                        +      ++ + K ++     +G+  RKVCAMPTWFESWER+DTY
Sbjct: 360  EKDVVDANERTAKVTPEKKKSNNKKPLSRINSSKGSSARKVCAMPTWFESWERDDTY 416


>gb|AAL24198.1| AT4g26620/T15N24_70 [Arabidopsis thaliana] gi|27363400|gb|AAO11619.1|
            At4g26620/T15N24_70 [Arabidopsis thaliana]
          Length = 443

 Score =  446 bits (1147), Expect = e-123
 Identities = 233/408 (57%), Positives = 272/408 (66%), Gaps = 10/408 (2%)
 Frame = -3

Query: 1436 DNYLMTNTGSNSASGSFQNNENGFLYYXXXXXXXXXXXXXXSDVEFGFLRPELVRRQNNP 1257
            DN+L   T   S SGSFQ+                      +D +FGF RP+    Q   
Sbjct: 31   DNFLGEPT---SRSGSFQSES----------LLGGGGGESINDADFGFARPDFRSEQ--- 74

Query: 1256 PLVGTVEIYNRHIFLCYKNPKVWPPHVEAAEFDRLPRXXXXXXXXXXAEINRMTRLTICE 1077
             L GTV+ Y RH+FLCYK P VWP  +EAAEFDRLPR            + + TRLTICE
Sbjct: 75   -LAGTVQFYERHVFLCYKKPSVWPARIEAAEFDRLPRLLSAAVSARKGSMKKETRLTICE 133

Query: 1076 GHDGTETSNGDVLIFPDMIRYRRLTHFDVDTFVEEVLVKDGEWHPGTPEALKGSYVFVCS 897
            GHDGTETSNGDVLIFPDMIRYRRLTHFDV+TFVEEVLVKDGEW PG PE LKGSYVFVCS
Sbjct: 134  GHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGNPELLKGSYVFVCS 193

Query: 896  HGSRDRRCGVCGPALVTRFSEEIDAHGLQGQVSVSPCSHIGGHKYAGNVIIFCRDVNGEV 717
            HGSRDRRCGVCGP+LV+RF EE++ HGLQG+VS+SPCSHIGGHKYAGNVII+  ++N EV
Sbjct: 194  HGSRDRRCGVCGPSLVSRFREELEFHGLQGKVSISPCSHIGGHKYAGNVIIYRSNINREV 253

Query: 716  TGHWYGYVTPDDVPILLEQHIGKGEIIDRLWRGQMGLSEDDQKKAQELRLQLSSETGMEK 537
            TGHWYGYVTP+DVPILLEQHI KGEI+DRLWRG+MGLSE+DQKK QE R QL+      K
Sbjct: 254  TGHWYGYVTPEDVPILLEQHINKGEIVDRLWRGEMGLSEEDQKKTQEGRFQLNGTVHSVK 313

Query: 536  -GTKVSIQTFEAGHPGNCNQVEVA---GCCQGIAN-TICCQNSVSAXXXXXXXXVDRKEP 372
               KVS ++       +C Q   A   GCCQ   N + CCQ+  +          ++ E 
Sbjct: 314  INGKVSQESSVHNADVSCCQSRAAEPNGCCQQNGNSSSCCQDDTTLMLSLGTSEDNQLES 373

Query: 371  LAAAGRNTSGKQINGTI-----KGRGACTRKVCAMPTWFESWEREDTY 243
                 + T G++I           +G+ TRKVC +PTW ESWEREDTY
Sbjct: 374  ENNTEKLTPGRKIAEKTFFRINSDKGSSTRKVCGIPTWLESWEREDTY 421


Top