BLASTX nr result

ID: Coptis23_contig00021775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021775
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [S...    90   2e-16
ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resista...    89   3e-16
ref|XP_002969152.1| ATP-binding cassette transporter [Selaginell...    83   3e-14

>ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|222857845|gb|EEE95392.1|
           predicted protein [Populus trichocarpa]
          Length = 1605

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/119 (54%), Positives = 72/119 (60%)
 Frame = +1

Query: 1   PIFYKHREQGFFRASSYTVAHCILNLPQTFIEVIISYTFAP*R*QNALPH*SLD*QNVFQ 180
           PIFYKH+ Q FFR SSY VA+CI+NLPQT +E                            
Sbjct: 713 PIFYKHKAQRFFRVSSYIVANCIVNLPQTLLE---------------------------- 744

Query: 181 ALAYTLCIYFLAGLSMVGNGALFFHYLTLLFFVAYFGSSIFFFLSAISPIPEIANAFAG 357
           AL YTL  YFLAGLSM G G+  F YL LLF VAYFGSS+FFFLS IS IPE+ NA AG
Sbjct: 745 ALIYTLFAYFLAGLSMAGKGSPLFAYLALLFLVAYFGSSVFFFLSTISSIPEVGNALAG 803


>ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [Sorghum bicolor]
           gi|241944069|gb|EES17214.1| hypothetical protein
           SORBIDRAFT_08g018460 [Sorghum bicolor]
          Length = 1532

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 8/93 (8%)
 Frame = +1

Query: 172 VFQALAYTLCIYFLAGLSMVGNGALFFHYLTLLFFVAYFGSSIFFFLSAISPIPEIANAF 351
           + QA  Y++C+YFLAGL++  NG  F  YL L+F VAYFGSS FFFLSA++PIPE ANA 
Sbjct: 648 IIQAFCYSVCVYFLAGLTLENNGVAFIDYLVLMFLVAYFGSSFFFFLSAVAPIPEAANAL 707

Query: 352 AG---SPFYL-S*LKLNPMNNISY----LHFNP 426
           AG   S F L S   + P N   Y    +H NP
Sbjct: 708 AGLIVSIFLLFSGFVIFPSNIPQYWKWLMHINP 740


>ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resistance protein 7-like
           [Vitis vinifera]
          Length = 1538

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/58 (74%), Positives = 47/58 (81%)
 Frame = +1

Query: 184 LAYTLCIYFLAGLSMVGNGALFFHYLTLLFFVAYFGSSIFFFLSAISPIPEIANAFAG 357
           LAY LC+YFLAGL + GNGA FF YL LLF VA FGSS+FFFLSAIS IPEI NA +G
Sbjct: 676 LAYALCVYFLAGLPLEGNGAPFFEYLVLLFLVANFGSSVFFFLSAISSIPEIGNALSG 733


>ref|XP_002969152.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300163657|gb|EFJ30268.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1483

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/119 (39%), Positives = 62/119 (52%)
 Frame = +1

Query: 1   PIFYKHREQGFFRASSYTVAHCILNLPQTFIEVIISYTFAP*R*QNALPH*SLD*QNVFQ 180
           P+F KHRE  FF  SSY VAH +++LPQ+ +E II                         
Sbjct: 613 PVFQKHRELHFFPVSSYVVAHGLVSLPQSLLEAII------------------------- 647

Query: 181 ALAYTLCIYFLAGLSMVGNGALFFHYLTLLFFVAYFGSSIFFFLSAISPIPEIANAFAG 357
              Y++C YFLAGLS+  N A +F YL L+F + Y GSS  F +   +P+ E A A AG
Sbjct: 648 ---YSMCTYFLAGLSLE-NAAHYFQYLALIFVIGYMGSSFVFLVGGFAPLLENAAALAG 702


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