BLASTX nr result

ID: Coptis23_contig00021774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021774
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago ...   117   7e-25
ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267...   116   2e-24
emb|CBI16355.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002513492.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23

>ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago truncatula]
           gi|355508432|gb|AES89574.1| hypothetical protein
           MTR_4g077160 [Medicago truncatula]
          Length = 502

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/95 (61%), Positives = 69/95 (72%)
 Frame = -3

Query: 288 SSSAXXXXXXXXVLLHKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVR 109
           SSSA         + H+EN+  E  +CSG CK IVR+IVEQVR E EQWSQMQEML +VR
Sbjct: 271 SSSASTSKRVEFQVPHQENLSCEANLCSGHCKTIVRRIVEQVRVETEQWSQMQEMLGQVR 330

Query: 108 DEMEDLQCSRVFWQDRALDSDDHVQSLQSSVQEWK 4
           +EME+LQ SR FW+DRAL SD  +QSL + VQEWK
Sbjct: 331 EEMEELQASRDFWKDRALHSDSQIQSLHNDVQEWK 365


>ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267248 [Vitis vinifera]
          Length = 507

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/103 (58%), Positives = 72/103 (69%)
 Frame = -3

Query: 312 RRIEFPHLSSSAXXXXXXXXVLLHKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQM 133
           RRIE P  SSS            H+E +  E+  CSGRCK IVR+I+EQVR E EQWSQM
Sbjct: 290 RRIEAPDSSSSPVPKP-------HQETVSHEEHGCSGRCKVIVRRIMEQVRTETEQWSQM 342

Query: 132 QEMLERVRDEMEDLQCSRVFWQDRALDSDDHVQSLQSSVQEWK 4
           QEMLE+VR+EME+L  SR FW+DRALDS+  +Q L S V+EWK
Sbjct: 343 QEMLEQVREEMEELNASRDFWEDRALDSECLIQYLHSDVEEWK 385


>emb|CBI16355.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/103 (58%), Positives = 72/103 (69%)
 Frame = -3

Query: 312 RRIEFPHLSSSAXXXXXXXXVLLHKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQM 133
           RRIE P  SSS            H+E +  E+  CSGRCK IVR+I+EQVR E EQWSQM
Sbjct: 305 RRIEAPDSSSSPVPKP-------HQETVSHEEHGCSGRCKVIVRRIMEQVRTETEQWSQM 357

Query: 132 QEMLERVRDEMEDLQCSRVFWQDRALDSDDHVQSLQSSVQEWK 4
           QEMLE+VR+EME+L  SR FW+DRALDS+  +Q L S V+EWK
Sbjct: 358 QEMLEQVREEMEELNASRDFWEDRALDSECLIQYLHSDVEEWK 400


>ref|XP_002513492.1| conserved hypothetical protein [Ricinus communis]
           gi|223547400|gb|EEF48895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 527

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/100 (61%), Positives = 73/100 (73%)
 Frame = -3

Query: 303 EFPHLSSSAXXXXXXXXVLLHKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEM 124
           EFP +SSS+            KE    E++ CSG CK IVR++VEQVRAE EQWSQMQEM
Sbjct: 295 EFPEISSSSLRQPC-------KELKPYEERPCSGGCKAIVRRVVEQVRAETEQWSQMQEM 347

Query: 123 LERVRDEMEDLQCSRVFWQDRALDSDDHVQSLQSSVQEWK 4
           L +VR EME+LQ SR FW+DRALDSD  +QSLQS+V+EWK
Sbjct: 348 LGQVRHEMEELQVSRDFWEDRALDSDYQIQSLQSAVKEWK 387


>ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|222849752|gb|EEE87299.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/103 (56%), Positives = 71/103 (68%)
 Frame = -3

Query: 312 RRIEFPHLSSSAXXXXXXXXVLLHKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQM 133
           R IEFP   SS+                 +E+K CSG CK IVR ++EQV+AE EQWSQM
Sbjct: 285 RIIEFPDKPSSSTRQPC------------KEEKTCSGCCKIIVRSVIEQVQAETEQWSQM 332

Query: 132 QEMLERVRDEMEDLQCSRVFWQDRALDSDDHVQSLQSSVQEWK 4
           QEML +VR+EME+LQ SR FW+DRALDSD  +QSL S+VQEW+
Sbjct: 333 QEMLGQVRNEMEELQASRDFWEDRALDSDCQIQSLNSAVQEWR 375


Top