BLASTX nr result
ID: Coptis23_contig00021753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021753
(1187 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Viti... 368 1e-99
gb|AFR78197.1| transcription factor bHLH [Vitis vinifera] gi|404... 367 2e-99
gb|AFH68208.1| transcription factor bHLH [Vitis amurensis] gi|38... 367 4e-99
ref|XP_002264407.1| PREDICTED: transcription factor bHLH93-like ... 366 5e-99
emb|CBI19312.3| unnamed protein product [Vitis vinifera] 332 1e-88
>ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Vitis vinifera]
Length = 334
Score = 368 bits (945), Expect = 1e-99
Identities = 202/337 (59%), Positives = 245/337 (72%), Gaps = 5/337 (1%)
Frame = -2
Query: 1078 MEFNEHGFXXXXXXXXXXXXETFPNGIMSDQLFGNDWSLDC-VNRNFDGIIPNSSFEGFN 902
ME NEHGF ET P G+ ++ F + W D + N +PNSSFE F+
Sbjct: 1 MEVNEHGFLEELLALRGDPWETIPTGM--NEFFSHGWGFDYRFDENPVTFLPNSSFEAFS 58
Query: 901 VSVEPSFNCSLNDNVHYPFEDGYLLPEM-NSLYQKRDTLTFPFQEDIPLVTEYEEQCLLK 725
+EP F S N+ ++ PF D + P++ +S Y K+DT FP QED P EE+ +
Sbjct: 59 GPIEPGFGYSFNE-MYSPFGDEFSTPQVTDSSYTKQDTPPFPTQEDYPFPMMEEEEPAVH 117
Query: 724 D--ESHNLEEKGTICKVESTQAIETPTFSMGVCLDRKNKN-KKVEGQPSKNLMAEXXXXX 554
+ HN+ + T CKVE Q+ E P F++GVC + KNK KKVEGQPSKNLMAE
Sbjct: 118 PGVDLHNMGLQAT-CKVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRK 176
Query: 553 RLNDRLSMLRSVVPRISKMDRTSILGDTIEYMKELLEKIKNLQDEIEVGSNQLNLGAILK 374
RLNDRLSMLRSVVP+ISKMDRTSILGDTI+YMKELLE+I NLQ+E EV S+QLNL I K
Sbjct: 177 RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQLNLLGIFK 236
Query: 373 DLRTNEILVRNTPKFDVERRNMDTRVEICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFN 194
DL+ NEI+VRN+PKFDVERRNMDTR+EICC+ KPGLLLST++TLEA GLEIQQCVISCFN
Sbjct: 237 DLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFN 296
Query: 193 DFALQASCSEGLEKRGIVSSEEIKEALFRNSGYGGRC 83
DF++QASCSE LEKR +VSSEE+K+ LFRN+GYGGRC
Sbjct: 297 DFSMQASCSEELEKRTMVSSEELKQTLFRNAGYGGRC 333
>gb|AFR78197.1| transcription factor bHLH [Vitis vinifera]
gi|404551202|gb|AFR78198.1| transcription factor bHLH
[Vitis vinifera]
Length = 334
Score = 367 bits (943), Expect = 2e-99
Identities = 202/337 (59%), Positives = 246/337 (72%), Gaps = 5/337 (1%)
Frame = -2
Query: 1078 MEFNEHGFXXXXXXXXXXXXETFPNGIMSDQLFGNDWSLDC-VNRNFDGIIPNSSFEGFN 902
ME NE GF ET P G+ ++ F + W D + N +PNSSFEGF+
Sbjct: 1 MEVNERGFLEELLALRGDPWETIPTGM--NEFFSHGWGFDYRFDENPVTFLPNSSFEGFS 58
Query: 901 VSVEPSFNCSLNDNVHYPFEDGYLLPEM-NSLYQKRDTLTFPFQEDIPLVTEYEEQCLLK 725
+EP F S N+ ++ PF + + P++ +S Y K+DT FP QED P EE+ +
Sbjct: 59 GPIEPGFGYSFNE-MYSPFGEEFSTPQVTDSSYTKQDTPPFPTQEDYPFPMMEEEEPAVH 117
Query: 724 D--ESHNLEEKGTICKVESTQAIETPTFSMGVCLDRKNKN-KKVEGQPSKNLMAEXXXXX 554
+ HN+ + T CKVE Q+ E P F++GVC + KNK KKVEGQPSKNLMAE
Sbjct: 118 PGVDLHNMGLQAT-CKVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRK 176
Query: 553 RLNDRLSMLRSVVPRISKMDRTSILGDTIEYMKELLEKIKNLQDEIEVGSNQLNLGAILK 374
RLNDRLSMLRSVVP+ISKMDRTSILGDTI+YMKELLE+I NLQ+E EV S+QLNL I K
Sbjct: 177 RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQLNLLGIFK 236
Query: 373 DLRTNEILVRNTPKFDVERRNMDTRVEICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFN 194
DL+ NEI+VRN+PKFDVERRNMDTR+EICC+ KPGLLLST++TLEA GLEIQQCVISCFN
Sbjct: 237 DLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFN 296
Query: 193 DFALQASCSEGLEKRGIVSSEEIKEALFRNSGYGGRC 83
DF++QASCSE LEKR +VSSEE+K+ALFRN+GYGGRC
Sbjct: 297 DFSMQASCSEELEKRTMVSSEELKQALFRNAGYGGRC 333
>gb|AFH68208.1| transcription factor bHLH [Vitis amurensis]
gi|384157483|gb|AFH68209.1| transcription factor bHLH
[Vitis amurensis]
Length = 334
Score = 367 bits (941), Expect = 4e-99
Identities = 202/337 (59%), Positives = 245/337 (72%), Gaps = 5/337 (1%)
Frame = -2
Query: 1078 MEFNEHGFXXXXXXXXXXXXETFPNGIMSDQLFGNDWSLDC-VNRNFDGIIPNSSFEGFN 902
ME NE GF ET P G+ ++ F + W D + N +PNSSFE F+
Sbjct: 1 MEVNERGFLEELLALRGDPWETIPTGM--NEFFSHGWGFDYRFDENPVTFLPNSSFEAFS 58
Query: 901 VSVEPSFNCSLNDNVHYPFEDGYLLPEM-NSLYQKRDTLTFPFQEDIPLVTEYEEQCLLK 725
+EP F S N+ ++ PF D + P++ +S Y K+DT FP QED P EE+ +
Sbjct: 59 GPIEPGFGYSFNE-MYSPFGDEFSTPQVTDSSYTKQDTPPFPTQEDYPFPMMEEEEPAVH 117
Query: 724 D--ESHNLEEKGTICKVESTQAIETPTFSMGVCLDRKNKN-KKVEGQPSKNLMAEXXXXX 554
+ HN+ + T CKVE Q+ E P F++GVC + KNK KKVEGQPSKNLMAE
Sbjct: 118 PGVDLHNMGLQAT-CKVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRK 176
Query: 553 RLNDRLSMLRSVVPRISKMDRTSILGDTIEYMKELLEKIKNLQDEIEVGSNQLNLGAILK 374
RLNDRLSMLRSVVP+ISKMDRTSILGDTI+YMKELLE+I NLQ+E EV S+QLNL I K
Sbjct: 177 RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQLNLLGIFK 236
Query: 373 DLRTNEILVRNTPKFDVERRNMDTRVEICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFN 194
DL+ NEI+VRN+PKFDVERRNMDTR+EICC+ KPGLLLST++TLEA GLEIQQCVISCFN
Sbjct: 237 DLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFN 296
Query: 193 DFALQASCSEGLEKRGIVSSEEIKEALFRNSGYGGRC 83
DF++QASCSE LEKR +VSSEE+K+ALFRN+GYGGRC
Sbjct: 297 DFSMQASCSEELEKRTMVSSEELKQALFRNAGYGGRC 333
>ref|XP_002264407.1| PREDICTED: transcription factor bHLH93-like [Vitis vinifera]
Length = 331
Score = 366 bits (940), Expect = 5e-99
Identities = 190/334 (56%), Positives = 242/334 (72%), Gaps = 2/334 (0%)
Frame = -2
Query: 1078 MEFNEHGFXXXXXXXXXXXXETFPNGIMSDQLFGNDWSLDCVNRNFDGIIPNSSFEGFNV 899
ME ++HG TF + + ++ F N W+ D + N N SFEGF+
Sbjct: 1 MEPSQHGLLEEFLALRRDTCSTFTSAV--NEFFPNGWNFDAFDENQVLSTSNPSFEGFST 58
Query: 898 SVEPSFNCSLNDNVHYPFEDGYLLPEMNSLYQKRD-TLTFPFQEDIPLVTEYEEQCLLKD 722
EP F C ++ YP DG+ + E++S Y K D T FP QE+ P + E E+ LL
Sbjct: 59 PTEPIFECPFSEV--YPSVDGFTVAEIDSSYHKNDGTPPFPIQEEYPSLVEDEDIGLLNS 116
Query: 721 ESHNLEEKGTICKVESTQAIETPTFSMGVCLDRKNKNKKVEGQPSKNLMAEXXXXXRLND 542
+ H LEE+ T CKVE QA++ P F++G+C +RK + KK+EGQPSKNLMAE RLND
Sbjct: 117 DLHGLEERNTSCKVEMEQAMDAPVFNLGLCGERKARVKKLEGQPSKNLMAERRRRKRLND 176
Query: 541 RLSMLRSVVPRISKMDRTSILGDTIEYMKELLEKIKNLQDE-IEVGSNQLNLGAILKDLR 365
RLSMLRS+VP+ISKMDRTSILGDTI+YMKELLEKI LQ+E IEVGS+Q NL I K+L+
Sbjct: 177 RLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINKLQEEEIEVGSDQTNLMGIFKELK 236
Query: 364 TNEILVRNTPKFDVERRNMDTRVEICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFA 185
NE+LVRN+PKFDVERRNMDTR+EICC++KPGLLLST++TLE GLEIQQCVISCFNDF+
Sbjct: 237 PNEVLVRNSPKFDVERRNMDTRIEICCAAKPGLLLSTVNTLELLGLEIQQCVISCFNDFS 296
Query: 184 LQASCSEGLEKRGIVSSEEIKEALFRNSGYGGRC 83
+QASCS+ +E++ +SE+IK+ALFRN+GYGGRC
Sbjct: 297 MQASCSDVVEQQAETNSEDIKQALFRNAGYGGRC 330
>emb|CBI19312.3| unnamed protein product [Vitis vinifera]
Length = 295
Score = 332 bits (851), Expect = 1e-88
Identities = 188/335 (56%), Positives = 223/335 (66%), Gaps = 3/335 (0%)
Frame = -2
Query: 1078 MEFNEHGFXXXXXXXXXXXXETFPNGIMSDQLFGNDWSLDCVNRNFDGIIPNSSFEGFNV 899
ME NEHGF ET P G+ ++ F + W D
Sbjct: 1 MEVNEHGFLEELLALRGDPWETIPTGM--NEFFSHGWGFD-------------------- 38
Query: 898 SVEPSFNCSLNDNVHYPFEDGYLLPEMNSLYQKRDTLTFPFQEDIPLVTEYEEQCLLKD- 722
Y F++ P +S Y K+DT FP QED P EE+ +
Sbjct: 39 ---------------YRFDEN---PVTDSSYTKQDTPPFPTQEDYPFPMMEEEEPAVHPG 80
Query: 721 -ESHNLEEKGTICKVESTQAIETPTFSMGVCLDRKNKN-KKVEGQPSKNLMAEXXXXXRL 548
+ HN+ + T CKVE Q+ E P F++GVC + KNK KKVEGQPSKNLMAE RL
Sbjct: 81 VDLHNMGLQAT-CKVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRL 139
Query: 547 NDRLSMLRSVVPRISKMDRTSILGDTIEYMKELLEKIKNLQDEIEVGSNQLNLGAILKDL 368
NDRLSMLRSVVP+ISKMDRTSILGDTI+YMKELLE+I NLQ+E EV S+QLNL I KDL
Sbjct: 140 NDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQLNLLGIFKDL 199
Query: 367 RTNEILVRNTPKFDVERRNMDTRVEICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDF 188
+ NEI+VRN+PKFDVERRNMDTR+EICC+ KPGLLLST++TLEA GLEIQQCVISCFNDF
Sbjct: 200 KPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDF 259
Query: 187 ALQASCSEGLEKRGIVSSEEIKEALFRNSGYGGRC 83
++QASCSE LEKR +VSSEE+K+ LFRN+GYGGRC
Sbjct: 260 SMQASCSEELEKRTMVSSEELKQTLFRNAGYGGRC 294