BLASTX nr result

ID: Coptis23_contig00021747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021747
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...    57   1e-06
emb|CBI26749.3| unnamed protein product [Vitis vinifera]               57   1e-06
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]    57   1e-06
ref|XP_003567267.1| PREDICTED: ABC transporter C family member 3...    55   5e-06
ref|XP_002468061.1| hypothetical protein SORBIDRAFT_01g038915 [S...    55   6e-06

>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 2    VITIAHRITSVLDSDMVLVLDSGLIVEHDTP 94
            VITIAHRITSVLDSDMVL+LD GLI EHDTP
Sbjct: 1430 VITIAHRITSVLDSDMVLLLDHGLIEEHDTP 1460


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 2    VITIAHRITSVLDSDMVLVLDSGLIVEHDTP 94
            VITIAHRITSVLDSDMVL+LD GLI EHDTP
Sbjct: 1214 VITIAHRITSVLDSDMVLLLDHGLIEEHDTP 1244


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 2    VITIAHRITSVLDSDMVLVLDSGLIVEHDTP 94
            VITIAHRITSVLDSDMVL+LD GLI EHDTP
Sbjct: 1403 VITIAHRITSVLDSDMVLLLDHGLIEEHDTP 1433


>ref|XP_003567267.1| PREDICTED: ABC transporter C family member 3-like [Brachypodium
            distachyon]
          Length = 1466

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 2    VITIAHRITSVLDSDMVLVLDSGLIVEHDTP 94
            VITIAHRITSVLDSD+VL+LD+GL VEH+TP
Sbjct: 1413 VITIAHRITSVLDSDIVLLLDNGLAVEHETP 1443


>ref|XP_002468061.1| hypothetical protein SORBIDRAFT_01g038915 [Sorghum bicolor]
           gi|241921915|gb|EER95059.1| hypothetical protein
           SORBIDRAFT_01g038915 [Sorghum bicolor]
          Length = 113

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +2

Query: 2   VITIAHRITSVLDSDMVLVLDSGLIVEHDTP 94
           VITIAHRITSVLDSDMVL+LD+G+ VEHD P
Sbjct: 58  VITIAHRITSVLDSDMVLLLDNGVAVEHDRP 88


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