BLASTX nr result

ID: Coptis23_contig00021742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021742
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549739.1| PREDICTED: putative clathrin assembly protei...    63   2e-08
ref|XP_003542645.1| PREDICTED: putative clathrin assembly protei...    63   2e-08
ref|XP_003609412.1| hypothetical protein MTR_4g115420 [Medicago ...    63   2e-08
ref|XP_004150528.1| PREDICTED: putative clathrin assembly protei...    63   3e-08
ref|XP_002285448.2| PREDICTED: putative clathrin assembly protei...    63   3e-08

>ref|XP_003549739.1| PREDICTED: putative clathrin assembly protein At5g35200-like
           [Glycine max]
          Length = 548

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 278 VEHIAKEKHXXXXXXXXXXSRPRADVAYCIYALAKRLSKTHNWAIRTFTFLSLLLFCYRN 99
           VE  AKEKH          +RPRADVAYCI+ALA+RLSKTHNWA+     L  L+  +R 
Sbjct: 45  VERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVA----LKTLIVIHRA 100

Query: 98  TT*LDP 81
              +DP
Sbjct: 101 LREVDP 106


>ref|XP_003542645.1| PREDICTED: putative clathrin assembly protein At5g35200-like
           [Glycine max]
          Length = 546

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 278 VEHIAKEKHXXXXXXXXXXSRPRADVAYCIYALAKRLSKTHNWAIRTFTFLSLLLFCYRN 99
           VE  AKEKH          +RPRADVAYCI+ALA+RLSKTHNWA+     L  L+  +R 
Sbjct: 45  VERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVA----LKTLIVIHRA 100

Query: 98  TT*LDP 81
              +DP
Sbjct: 101 LREVDP 106


>ref|XP_003609412.1| hypothetical protein MTR_4g115420 [Medicago truncatula]
           gi|355510467|gb|AES91609.1| hypothetical protein
           MTR_4g115420 [Medicago truncatula]
          Length = 545

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 278 VEHIAKEKHXXXXXXXXXXSRPRADVAYCIYALAKRLSKTHNWAIRTFTFLSLLLFCYRN 99
           VE  AKEKH          +RPRADVAYCI+ALA+RLSKTHNWA+     L  L+  +R 
Sbjct: 45  VERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVA----LKTLIVIHRA 100

Query: 98  TT*LDP 81
              +DP
Sbjct: 101 LREVDP 106


>ref|XP_004150528.1| PREDICTED: putative clathrin assembly protein At5g35200-like
           [Cucumis sativus] gi|449526473|ref|XP_004170238.1|
           PREDICTED: putative clathrin assembly protein
           At5g35200-like [Cucumis sativus]
          Length = 554

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 278 VEHIAKEKHXXXXXXXXXXSRPRADVAYCIYALAKRLSKTHNWAIRTFTFLSLLLFCYRN 99
           VE  AKEKH          +RPRADVAYCI+ALA+RLSKTHNWA+     L  L+  +R 
Sbjct: 46  VERPAKEKHIRAIFAAISATRPRADVAYCIHALARRLSKTHNWAVA----LKTLVVIHRA 101

Query: 98  TT*LDP 81
              +DP
Sbjct: 102 LREVDP 107


>ref|XP_002285448.2| PREDICTED: putative clathrin assembly protein At5g35200 isoform 1
           [Vitis vinifera] gi|359484230|ref|XP_003633084.1|
           PREDICTED: putative clathrin assembly protein At5g35200
           isoform 2 [Vitis vinifera]
          Length = 555

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 278 VEHIAKEKHXXXXXXXXXXSRPRADVAYCIYALAKRLSKTHNWAIRTFTFLSLLLFCYRN 99
           VE  AKEKH          +RPRADVAYCI+ALA+RLSKTHNWA+     L  L+  +R 
Sbjct: 46  VERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVA----LKTLVVIHRA 101

Query: 98  TT*LDP 81
              +DP
Sbjct: 102 LREVDP 107


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