BLASTX nr result

ID: Coptis23_contig00021729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021729
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267524.1| PREDICTED: putative nuclease HARBI1-like [Vi...    83   2e-29
ref|XP_003534058.1| PREDICTED: uncharacterized protein LOC100811...    70   3e-25
ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855...    70   2e-23
ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853...    71   2e-23
ref|XP_003632566.1| PREDICTED: uncharacterized protein LOC100853...    67   3e-22

>ref|XP_002267524.1| PREDICTED: putative nuclease HARBI1-like [Vitis vinifera]
          Length = 391

 Score = 83.2 bits (204), Expect(2) = 2e-29
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = -2

Query: 384 GSAADARVLKSALEDPDARFPHPPEGKYYVVDAGYANIKGFLAPYRGV*YHL 229
           GS AD+RVL++ L+DPD  FP+ PEGKYY+VD+GY+NI+GF+APY+GV YHL
Sbjct: 210 GSVADSRVLRAVLDDPDQNFPNIPEGKYYLVDSGYSNIEGFIAPYQGVRYHL 261



 Score = 71.2 bits (173), Expect(2) = 2e-29
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 15/76 (19%)
 Frame = -3

Query: 230 YRGSKNPPRTKEELYNHRHSSLRNVIKRCFGVLKSRFLILKFAPAYPFETQRG------- 72
           YRG+   PR+ +EL+NHRH+ LRN I+R F VLK+RF ILK AP Y F  QR        
Sbjct: 264 YRGANQLPRSAKELFNHRHAFLRNAIQRSFDVLKARFPILKLAPQYAFHIQRDIVIAACV 323

Query: 71  --------RKNDWIFT 48
                    +NDW+FT
Sbjct: 324 IHNHIRREERNDWLFT 339


>ref|XP_003534058.1| PREDICTED: uncharacterized protein LOC100811756 [Glycine max]
          Length = 481

 Score = 70.1 bits (170), Expect(2) = 3e-25
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -2

Query: 384 GSAADARVLKSALEDPDARFPHPPEGKYYVVDAGYANIKGFLAPYRGV*Y 235
           GS  D+RVL++ L++PD  FP  P+GKYY+VD GY N +GF+APY+GV Y
Sbjct: 300 GSVTDSRVLRAVLDNPDQNFPQIPQGKYYLVDKGYLNTEGFIAPYQGVRY 349



 Score = 70.1 bits (170), Expect(2) = 3e-25
 Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 17/90 (18%)
 Frame = -3

Query: 230 YRGSKNPPRTKEELYNHRHSSLRNVIKRCFGVLKSRFLILKFAPAYPFETQRG------- 72
           +RG+   PR  +EL+NHRH  LRN I R F VLK+RF ILK AP Y F+ QR        
Sbjct: 354 FRGANQLPRNAKELFNHRHCFLRNAILRSFNVLKTRFPILKLAPQYSFQIQRDIVIAGCV 413

Query: 71  --------RKNDWIFTSF--SIPEE*LDLD 12
                    +NDWIF S   S  EE  D+D
Sbjct: 414 LHNFIRREERNDWIFNSVGGSPVEEISDID 443


>ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855100 [Vitis vinifera]
          Length = 409

 Score = 69.7 bits (169), Expect(2) = 2e-23
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -2

Query: 384 GSAADARVLKSALEDPDARFPHPPEGKYYVVDAGYANIKGFLAPYRGV*YHLQ 226
           G+  DARV   AL  P+  FP P EGKYYVVD+GY  I GFL PYRG  YHLQ
Sbjct: 227 GTTNDARVFLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQ 279



 Score = 64.3 bits (155), Expect(2) = 2e-23
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = -3

Query: 230 YRGSKNPPRTKEELYNHRHSSLRNVIKRCFGVLKSRFLILKFAPAY 93
           YRG +N P   +EL+N+RHSSLRN+I+RCFGVLK+RF I +  P Y
Sbjct: 281 YRGRRNQPIRYKELFNYRHSSLRNIIERCFGVLKTRFPISRMMPCY 326


>ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853519 [Vitis vinifera]
          Length = 414

 Score = 71.2 bits (173), Expect(2) = 2e-23
 Identities = 34/53 (64%), Positives = 37/53 (69%)
 Frame = -2

Query: 384 GSAADARVLKSALEDPDARFPHPPEGKYYVVDAGYANIKGFLAPYRGV*YHLQ 226
           G+A DARV   AL  P+  FP P EGKYYVVD+GY  I GFL PYRG  YHLQ
Sbjct: 227 GTANDARVFLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQ 279



 Score = 62.4 bits (150), Expect(2) = 2e-23
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -3

Query: 230 YRGSKNPPRTKEELYNHRHSSLRNVIKRCFGVLKSRFLILKFAPAY 93
           Y G  N P   +EL+N+RHSSLRN+I+RCFGVLK+RF IL+  P Y
Sbjct: 281 YWGRHNQPIRYKELFNYRHSSLRNIIERCFGVLKTRFPILRMMPCY 326


>ref|XP_003632566.1| PREDICTED: uncharacterized protein LOC100853389 [Vitis vinifera]
          Length = 311

 Score = 67.0 bits (162), Expect(2) = 3e-22
 Identities = 33/53 (62%), Positives = 35/53 (66%)
 Frame = -2

Query: 384 GSAADARVLKSALEDPDARFPHPPEGKYYVVDAGYANIKGFLAPYRGV*YHLQ 226
           G A DARV   AL  P+  FP P EGKYYVVD+GY  I  FL PYRG  YHLQ
Sbjct: 178 GIANDARVFLDALTRPEVNFPWPSEGKYYVVDSGYPCISRFLPPYRGERYHLQ 230



 Score = 62.8 bits (151), Expect(2) = 3e-22
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -3

Query: 230 YRGSKNPPRTKEELYNHRHSSLRNVIKRCFGVLKSRFLILKFAPAY 93
           YRG +N P   +EL+N+RHS LRN+I+RCFGVLK++F IL+  P Y
Sbjct: 232 YRGRRNQPIRYKELFNYRHSFLRNIIERCFGVLKTQFPILRMMPCY 277


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