BLASTX nr result

ID: Coptis23_contig00021728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021728
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   169   7e-40
emb|CBI26021.3| unnamed protein product [Vitis vinifera]              102   8e-20
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   102   8e-20
ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] g...    88   3e-15
gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indi...    88   3e-15

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  169 bits (428), Expect = 7e-40
 Identities = 107/275 (38%), Positives = 139/275 (50%), Gaps = 5/275 (1%)
 Frame = -3

Query: 827 LSPRWRFLYTAPSNLHFDLLSIFGITYDRTDWVKNSNNLWEGKLKFVRAVDQCLELCTSP 648
           LS RWR+L    S+L FD+ ++FG                E   KFV AVDQ L  C  P
Sbjct: 31  LSHRWRYLSPPLSHLQFDVFTLFGTH-------------GESSSKFVTAVDQVLLACRGP 77

Query: 647 KIYSFKVRYCLGIESSNHIDRWVSFAVRKQTEELYLHFSFVPQGCELYSFPCHLLPQGKA 468
           KI + KVR+ LG + + H+DRWVSF+   Q E++   FS  P+ C  Y+FPCH+LP  KA
Sbjct: 78  KIGTVKVRFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKA 137

Query: 467 SQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFLKLKNCS 288
           S LKHL L SC ++ SP F +  N L  L L+ VPLDQS    I   C  L  L++  C 
Sbjct: 138 SHLKHLCLVSCTLRLSPKFTSQLNPLRTLDLDGVPLDQSGLDIITSACPKLTLLRMIGCG 197

Query: 287 LPATFFIAGHLRLRELFLKHCGRANKXXXXXXXXXXINLSTLDFFGELNKLHLIDVASLK 108
           LP    I G L   +  + H                INL   +FFG   KL  +DV  LK
Sbjct: 198 LPKIVCIHGQLLCLKTLIIH------DSLISVELKSINLEIFEFFGHPRKLTFVDVPHLK 251

Query: 107 -----DVFVYPSARDSIFNEPAEDLPQLKNLKQVL 18
                 +F+Y      I N  A+DLPQL+ L  ++
Sbjct: 252 KALVRSLFIY-RRTSPICNALAKDLPQLQFLSLIV 285


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  102 bits (255), Expect = 8e-20
 Identities = 93/291 (31%), Positives = 133/291 (45%), Gaps = 24/291 (8%)
 Frame = -3

Query: 827 LSPRWRFLYTAPSNLHFDLLSIFGITYDRTDWVKNSNNLWEG--KLKFVRAVDQCLELCT 654
           LS RWR ++T  S L FD  S+ GI    T    N   L       KFV  VDQ +   +
Sbjct: 44  LSKRWRSIWTCHSELWFDAASVLGIGDCSTSMSGNQPELNSQMQSSKFVERVDQFMYYRS 103

Query: 653 SP-KIYSFKVRYCLGIESSNHIDRWVSFAVRKQTEELYL----HFSF-------VPQGCE 510
              KI SF + + LG E  +HID+W++ AV K  E + L    +FSF            +
Sbjct: 104 QGRKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQ 163

Query: 509 LYSFPCHL--LPQGKASQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDI 336
           +Y FPC L  +P G+ + LKHL L SC +   P  +N   SL  + L  V +      D+
Sbjct: 164 IYEFPCRLFSVPGGRCT-LKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDL 221

Query: 335 LLGCVNLEFLKLKNCS-LPATFFIAGHLRLRELFLKHCGRANKXXXXXXXXXXINLSTLD 159
           L  C +LE+L L  C+ L    F A +L+L+ L +K+C R              +L T  
Sbjct: 222 LSTCSHLEWLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLE-----TIEIHAADLVTFK 276

Query: 158 FFGELNKLHLIDVASLK----DVFVYPSARDSI---FNEPAEDLPQLKNLK 27
           + G L      +V  L     + F+  S  + +        +DLPQL+ LK
Sbjct: 277 YGGHLPSFSFKNVPKLAKASLEFFIKSSRTEGVMYALTRFPQDLPQLETLK 327


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  102 bits (255), Expect = 8e-20
 Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 24/291 (8%)
 Frame = -3

Query: 827  LSPRWRFLYTAPSNLHFDLLSIFGITYDRTDWVKNSNNLWEG--KLKFVRAVDQCLELCT 654
            LS RWR ++T  S L FD  S+ GI         N   L       KFV  VDQ +   +
Sbjct: 1346 LSKRWRSIWTCHSELWFDAASVLGIGDCSXSMSGNQPELNSQMQSXKFVERVDQFMYYRS 1405

Query: 653  S-PKIYSFKVRYCLGIESSNHIDRWVSFAVRKQTEELYL----HFSF-------VPQGCE 510
              PKI SF + + LG E  +HID+W++ AV K  E + L    +FSF            +
Sbjct: 1406 QGPKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQ 1465

Query: 509  LYSFPCHL--LPQGKASQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDI 336
            +Y FPC L  +P G+ + LKHL L SC +   P  +N   SL  + L  V +      D+
Sbjct: 1466 IYEFPCRLFSVPGGRCT-LKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDL 1523

Query: 335  LLGCVNLEFLKLKNCS-LPATFFIAGHLRLRELFLKHCGRANKXXXXXXXXXXINLSTLD 159
            L  C +LE L L  C+ L    F A +L+L+ L +K+C R              +L T  
Sbjct: 1524 LSTCSHLERLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLE-----TIEIHAADLVTFK 1578

Query: 158  FFGELNKLHLIDVASLK----DVFVYPSARDSI---FNEPAEDLPQLKNLK 27
            + G L      +V  L     + F+  S  + +        +DLPQL+ LK
Sbjct: 1579 YGGHLPSFSFKNVPKLAKASLEFFIKSSRTEGVMYALTRFPQDLPQLETLK 1629


>ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group]
           gi|77553566|gb|ABA96362.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|125578377|gb|EAZ19523.1| hypothetical protein
           OsJ_35088 [Oryza sativa Japonica Group]
           gi|255670007|dbj|BAH95498.1| Os12g0127400 [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
 Frame = -3

Query: 827 LSPRWRFLYTAPSNLHFDLLSIFGITYDRTDWVKNSNNLWEGKLKFVRAVDQCLELCTSP 648
           +S  WR  +T   NL+F + ++ G    R     + N       KF++ VD  LE     
Sbjct: 87  VSTNWRQAWTFHPNLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGT 146

Query: 647 KIYSFKVRYCLGIESSNHIDRWVSFAVRKQTEELYLHFSFVPQGCE-LYSFPCHLLPQGK 471
            +  F V++ L  E +NH++ WV+FA+  +   + L FS   +  E  Y FPCH+  +  
Sbjct: 147 MVNKFAVKFGLSNEHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHN 206

Query: 470 ASQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFLKLKNC 291
            S L+ L L S  + P  DF   F +L  L L+NV L   +   ++  C  LE+L +++C
Sbjct: 207 GSYLEALRLDSVTLNPPLDFCG-FANLKLLALDNVRLQHLE--QLISKCHVLEWLSIQSC 263

Query: 290 SLPATFFIAGHL-RLRELFLKHCGRANKXXXXXXXXXXINLSTLDFFGELNKLHLIDVAS 114
           +      ++  L RL+ L ++ C                NL+T ++ G L  + L + ++
Sbjct: 264 NQLHNLHVSEPLCRLQCLSIQGC------HLQRMELHAPNLTTFEYDGSLALVTLNECSN 317

Query: 113 LK 108
           +K
Sbjct: 318 IK 319


>gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indica Group]
          Length = 446

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
 Frame = -3

Query: 827 LSPRWRFLYTAPSNLHFDLLSIFGITYDRTDWVKNSNNLWEGKLKFVRAVDQCLELCTSP 648
           +S  WR  +T   NL+F + ++ G    R     + N       KF++ VD  LE     
Sbjct: 87  VSTNWRQAWTFHPNLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGT 146

Query: 647 KIYSFKVRYCLGIESSNHIDRWVSFAVRKQTEELYLHFSFVPQGCE-LYSFPCHLLPQGK 471
            +  F V++ L  E +NH++ WV+FA+  +   + L FS   +  E  Y FPCH+  +  
Sbjct: 147 MVNKFAVKFGLSNEHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHN 206

Query: 470 ASQLKHLSLKSCMMKPSPDFANCFNSLTKLQLNNVPLDQSDFCDILLGCVNLEFLKLKNC 291
            S L+ L L S  + P  DF   F +L  L L+NV L   +   ++  C  LE+L +++C
Sbjct: 207 GSYLEALRLDSVTLNPPLDFCG-FANLKLLALDNVRLQHLE--QLISKCHVLEWLSIQSC 263

Query: 290 SLPATFFIAGHL-RLRELFLKHCGRANKXXXXXXXXXXINLSTLDFFGELNKLHLIDVAS 114
           +      ++  L RL+ L ++ C                NL+T ++ G L  + L + ++
Sbjct: 264 NQLHNLHVSEPLCRLQCLSIQGC------HLQRMELHAPNLTTFEYDGSLALVTLNECSN 317

Query: 113 LK 108
           +K
Sbjct: 318 IK 319


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