BLASTX nr result

ID: Coptis23_contig00021719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021719
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-07

>ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1|
            predicted protein [Populus trichocarpa]
          Length = 1029

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 39/140 (27%)
 Frame = +1

Query: 1066 SRRKGSKDLGKNNENTSDAHLSVKPSFPAKKRVHVPQCLPSETP---------------- 1197
            SR+K S+ L ++N       ++ KPSFP KKRV VPQC  S T                 
Sbjct: 157  SRQKDSRKLDESNMELCGP-ITSKPSFPTKKRVQVPQCSLSGTSAQPEKLQTGSREIKKD 215

Query: 1198 -----------------------SPFFWLSNEADNNEDIERLSSQAMDIDRVAETPPQQH 1308
                                   SPFFWL      +ED E+ SSQ  D+D++ +  P   
Sbjct: 216  DFKNDSSVSRKNPVVDEKGERMLSPFFWL-----RDEDGEK-SSQHTDMDQLLDITPPNV 269

Query: 1309 PTFSDIKESDNESLDEA*TK 1368
            PTFSDIK+SD+E+  E+ +K
Sbjct: 270  PTFSDIKDSDDENPPESSSK 289


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