BLASTX nr result

ID: Coptis23_contig00021709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021709
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002318963.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-10
ref|XP_002316655.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
emb|CBI39569.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002453396.1| hypothetical protein SORBIDRAFT_04g005240 [S...    65   6e-09

>ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|222871699|gb|EEF08830.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 30/64 (46%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = -1

Query: 579 LRRILGNGMSNKTWETIVQHASSCIL-DNKRYVYYNSGRQVQLMFDSVYRLLGATFAGEI 403
           LR +LG+G+SN+TW+TI++HA++C++ D+K Y Y+++G+ + L+FDS+Y+++GA F G  
Sbjct: 290 LRNVLGSGISNRTWDTIIRHATTCVVDDSKFYSYFDAGQSIGLLFDSIYQVVGAMFDGHK 349

Query: 402 YKSL 391
           Y+ L
Sbjct: 350 YEPL 353


>ref|XP_002318963.1| predicted protein [Populus trichocarpa] gi|222857339|gb|EEE94886.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 26/55 (47%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = -1

Query: 585 SHLRRILGNGMSNKTWETIVQHASSCILDNKR-YVYYNSGRQVQLMFDSVYRLLG 424
           + LR +LG G+SN+ W+TI++HA++C+LDN R Y Y+++G+ + L+FDS+Y+++G
Sbjct: 190 TRLRTVLGCGISNRIWDTIIEHATTCVLDNSRFYSYFDAGQSIGLLFDSIYKVVG 244


>ref|XP_002316655.1| predicted protein [Populus trichocarpa] gi|222859720|gb|EEE97267.1|
           predicted protein [Populus trichocarpa]
          Length = 637

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -1

Query: 579 LRRILGNGMSNKTWETIVQHASSCILDNKRYVYY-NSGRQVQLMFDSVYRLLGATFAGEI 403
           LR ILG+GMSNK W+++V+HA +C+L  K Y+YY    + V ++F+++Y   G    GE 
Sbjct: 304 LRTILGSGMSNKMWDSLVEHAKTCVLSGKHYIYYPEDAKNVGIVFNNIYEFSGLIANGEY 363

Query: 402 YKS 394
           Y S
Sbjct: 364 YSS 366


>emb|CBI39569.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 26/65 (40%), Positives = 46/65 (70%)
 Frame = -1

Query: 585 SHLRRILGNGMSNKTWETIVQHASSCILDNKRYVYYNSGRQVQLMFDSVYRLLGATFAGE 406
           S LR++LGNG+SNK WE I++HA++ + D + YVY  +G  + ++  S+Y+++G TF   
Sbjct: 297 SSLRKLLGNGISNKIWEIIIEHANTYVGDEELYVYSRAGESLGVVLSSIYKIVGLTFDSH 356

Query: 405 IYKSL 391
            Y+++
Sbjct: 357 SYQAV 361


>ref|XP_002453396.1| hypothetical protein SORBIDRAFT_04g005240 [Sorghum bicolor]
           gi|241933227|gb|EES06372.1| hypothetical protein
           SORBIDRAFT_04g005240 [Sorghum bicolor]
          Length = 622

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -1

Query: 579 LRRILGNGMSNKTWETIVQHASSCILDNKRYVYY-NSGRQVQLMFDSVYRLLGATFAGEI 403
           LR ILG+GMSNK WET+V+HA +C+L  K Y+YY +  R +  +F+++Y   G     + 
Sbjct: 295 LRNILGSGMSNKMWETLVEHAKTCVLSGKYYIYYSDESRSIGAIFNNIYAFCGLISGEQF 354

Query: 402 YKS 394
           Y S
Sbjct: 355 YSS 357


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