BLASTX nr result

ID: Coptis23_contig00021705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021705
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   424   e-116
ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago ...   423   e-116
ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   420   e-115
ref|XP_004144168.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...   419   e-115
ref|XP_002890020.1| hypothetical protein ARALYDRAFT_888749 [Arab...   417   e-114

>ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297738087|emb|CBI27288.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  424 bits (1091), Expect = e-116
 Identities = 217/276 (78%), Positives = 241/276 (87%)
 Frame = -2

Query: 829 TRMIMEEWNGSSSTKLSKTAVITSTPSSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTP 650
           + + +EEW+GSSS+KLS+TA ITS    LS++R G+RF+ V  RILQAFVPEGFP+SVTP
Sbjct: 11  SEVTVEEWSGSSSSKLSRTATITS----LSIRRSGSRFSHVWRRILQAFVPEGFPSSVTP 66

Query: 649 DYVTFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGIL 470
           DY  FQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRD TGMLGGIL
Sbjct: 67  DYAPFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGIL 126

Query: 469 FTFYQGSSLDSNAKMWRLVAXXXXXXXXXXXLVSPLFPSAFIFIVCLGSISRSFTGVASG 290
           FTFYQGS+LDSNAKMWRLVA           LVSPLFPSAF+FIVCLGS+SRSFTGVASG
Sbjct: 127 FTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLVSPLFPSAFVFIVCLGSLSRSFTGVASG 186

Query: 289 ATRAALTQHFSLQNNAADISAKEGSQETLATMTGMVLGMLLAHITMGHPLSIWVSFLSLT 110
           ATRAALTQHF+LQNNAADISAKEGSQET+ATM GM  GMLLA ITMGH ++IW SFLSLT
Sbjct: 187 ATRAALTQHFALQNNAADISAKEGSQETVATMVGMAFGMLLARITMGHSVAIWFSFLSLT 246

Query: 109 VFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQ 2
           +FHMYANYRAV CL LTTLN+ER  IL++HFM++GQ
Sbjct: 247 MFHMYANYRAVRCLILTTLNSERSSILIEHFMETGQ 282


>ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago truncatula]
            gi|355515433|gb|AES97056.1| hypothetical protein
            MTR_5g044720 [Medicago truncatula]
          Length = 749

 Score =  423 bits (1087), Expect = e-116
 Identities = 220/299 (73%), Positives = 244/299 (81%)
 Frame = -2

Query: 898  NRFLSVIKKTH*QASYLKKAVKMTRMIMEEWNGSSSTKLSKTAVITSTPSSLSLQRYGTR 719
            N+   VI  +   +S    + K + + +EEWNGSS TKLSKT  I ++ SS S++R G R
Sbjct: 296  NKGFKVIMDSVSSSSSSSASNKTSLLTLEEWNGSSPTKLSKTFTIKASSSSFSIRRSGAR 355

Query: 718  FNQVSSRILQAFVPEGFPTSVTPDYVTFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKS 539
            F  V  R LQAFVPEGFP+SVTPDYV FQ+WD LQGLSTYIRTMLSTQALLSAIGVGEKS
Sbjct: 356  FTHVWRRFLQAFVPEGFPSSVTPDYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKS 415

Query: 538  ATVIGATFQWFLRDFTGMLGGILFTFYQGSSLDSNAKMWRLVAXXXXXXXXXXXLVSPLF 359
            ATVIGATFQWFLRD TGMLGGILFTFYQGS+LDSNAKMWRLVA           L+SPLF
Sbjct: 416  ATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLF 475

Query: 358  PSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQETLATMTGMVL 179
            PSAF+FIVCLGSISRSFTGVASGATRAALTQHF+LQ+NAADISAKEGSQET+ATM GM L
Sbjct: 476  PSAFVFIVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMAL 535

Query: 178  GMLLAHITMGHPLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQ 2
            GML+A IT GHPL+IW SFLSLT+FHMYANYRAV CLSL +LN ER  ILLQ FM+S Q
Sbjct: 536  GMLVARITTGHPLAIWFSFLSLTLFHMYANYRAVQCLSLNSLNPERSSILLQRFMESRQ 594


>ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 473

 Score =  420 bits (1080), Expect = e-115
 Identities = 213/280 (76%), Positives = 238/280 (85%)
 Frame = -2

Query: 841 AVKMTRMIMEEWNGSSSTKLSKTAVITSTPSSLSLQRYGTRFNQVSSRILQAFVPEGFPT 662
           +V    + +EEWNGSS TKLSKT  I ++ SS+ + R G RF  V  R+LQAFVPEGFP+
Sbjct: 40  SVSNKTITLEEWNGSSPTKLSKTFTIKASSSSVLITRSGARFTHVWRRLLQAFVPEGFPS 99

Query: 661 SVTPDYVTFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGML 482
           SVT DYV FQ+WD LQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRD TGML
Sbjct: 100 SVTADYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGML 159

Query: 481 GGILFTFYQGSSLDSNAKMWRLVAXXXXXXXXXXXLVSPLFPSAFIFIVCLGSISRSFTG 302
           GGILFTFYQGS+LDSNAKMWRLVA           L+SPLFPSAF+F+VCLGSISRSFTG
Sbjct: 160 GGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLFPSAFVFVVCLGSISRSFTG 219

Query: 301 VASGATRAALTQHFSLQNNAADISAKEGSQETLATMTGMVLGMLLAHITMGHPLSIWVSF 122
           VASGATRAALTQHF+LQ+NAADISAKEGSQET+ATM GM LGML+A +T+GHPL+IW SF
Sbjct: 220 VASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARLTIGHPLAIWFSF 279

Query: 121 LSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQ 2
           LSLTVFHMYANYRAV CL+L +LN ER  ILLQHFM++GQ
Sbjct: 280 LSLTVFHMYANYRAVRCLALNSLNPERSSILLQHFMETGQ 319


>ref|XP_004144168.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog
           [Cucumis sativus]
          Length = 437

 Score =  419 bits (1076), Expect = e-115
 Identities = 211/276 (76%), Positives = 242/276 (87%)
 Frame = -2

Query: 829 TRMIMEEWNGSSSTKLSKTAVITSTPSSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTP 650
           + +I+EE+NGSSS++L KTA+I+++PS L +QR G+RF  V  R   AFVPEGFP+SVTP
Sbjct: 8   SEVILEEYNGSSSSELRKTAIISASPSLL-IQRSGSRFRLVWRRFFDAFVPEGFPSSVTP 66

Query: 649 DYVTFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGIL 470
           DYV FQ+WDSLQGLSTYIRTMLSTQALLSAIGVGE+SATVIGATFQWFLRD TGMLGGIL
Sbjct: 67  DYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMLGGIL 126

Query: 469 FTFYQGSSLDSNAKMWRLVAXXXXXXXXXXXLVSPLFPSAFIFIVCLGSISRSFTGVASG 290
           FTFYQGS+LDSNAKMWRLVA           LVSPLFPSAF+ IVCLGS+SRSFTGVASG
Sbjct: 127 FTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASG 186

Query: 289 ATRAALTQHFSLQNNAADISAKEGSQETLATMTGMVLGMLLAHITMGHPLSIWVSFLSLT 110
           ATRAALTQHF+LQNNAADISAKEGSQET+ATM GM +GMLLA ITMG PL+IW+SFLSLT
Sbjct: 187 ATRAALTQHFALQNNAADISAKEGSQETVATMIGMAIGMLLARITMGCPLAIWLSFLSLT 246

Query: 109 VFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQ 2
           +FHMYANY+AVCCLSLT+LN +RC I LQH++Q+ +
Sbjct: 247 MFHMYANYKAVCCLSLTSLNPQRCSIALQHYIQTAE 282


>ref|XP_002890020.1| hypothetical protein ARALYDRAFT_888749 [Arabidopsis lyrata subsp.
           lyrata] gi|297335862|gb|EFH66279.1| hypothetical protein
           ARALYDRAFT_888749 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  417 bits (1071), Expect = e-114
 Identities = 215/274 (78%), Positives = 236/274 (86%)
 Frame = -2

Query: 823 MIMEEWNGSSSTKLSKTAVITSTPSSLSLQRYGTRFNQVSSRILQAFVPEGFPTSVTPDY 644
           +I+EEWNGSSSTKL KTA IT++ +SLS+QR   RFN V  R+LQAFVPEGFP SVTPDY
Sbjct: 12  IILEEWNGSSSTKLFKTATITAS-ASLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDY 70

Query: 643 VTFQLWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFT 464
           V FQ WD+LQGLSTYI+ MLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFT
Sbjct: 71  VGFQFWDTLQGLSTYIKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFT 130

Query: 463 FYQGSSLDSNAKMWRLVAXXXXXXXXXXXLVSPLFPSAFIFIVCLGSISRSFTGVASGAT 284
           FYQGS+LDSNAKMWRLVA           L+SPLFPSAFI +VCLGS+SRSFTGVASGAT
Sbjct: 131 FYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGAT 190

Query: 283 RAALTQHFSLQNNAADISAKEGSQETLATMTGMVLGMLLAHITMGHPLSIWVSFLSLTVF 104
           RAALTQHF+LQ+NAADISAKEGSQET+ATM GM LGMLLA  T G+P++IW SFLSLTVF
Sbjct: 191 RAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPMAIWFSFLSLTVF 250

Query: 103 HMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQ 2
           HMYANYRAV CL L +LN ER  ILL HFMQ+GQ
Sbjct: 251 HMYANYRAVRCLVLNSLNFERSSILLTHFMQTGQ 284


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