BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021702
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S...   280   5e-73
gb|ACG35732.1| nucleic acid binding protein [Zea mays]                280   5e-73
ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea ma...   280   5e-73
ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   280   6e-73
ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g...   278   1e-72

>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
           gi|241934199|gb|EES07344.1| hypothetical protein
           SORBIDRAFT_04g029520 [Sorghum bicolor]
          Length = 286

 Score =  280 bits (716), Expect = 5e-73
 Identities = 136/152 (89%), Positives = 145/152 (95%)
 Frame = +1

Query: 295 VKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLIRGHGSIKDPVREDMMR 474
           VKKT++VDIP+DKYPT+NFVGR+LGPRGNSLKRVEANT+CRVLIRG GSIKDP RE+MMR
Sbjct: 135 VKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVEANTDCRVLIRGRGSIKDPAREEMMR 194

Query: 475 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDECQDFFKKQQLRELAM 654
           GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDE QDFFKKQQLRELAM
Sbjct: 195 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFFKKQQLRELAM 254

Query: 655 INGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 750
           +NGTLR+E  Q SGS SPFHNSLGMKRAKTRG
Sbjct: 255 LNGTLREEGMQRSGSASPFHNSLGMKRAKTRG 286



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = +3

Query: 33  SGGRYMPYSPSPSNTA-TQNISAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 209
           S GRYM YSPSPS T  +  I   R+ +AA+ EQ+ YLAELLAER K+ PF+PV+P S R
Sbjct: 2   SSGRYMAYSPSPSTTPHSPRIGGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSVR 61

Query: 210 LLNQEI-RIDTFSVSSKL 260
           LLNQEI R+ T   ++ L
Sbjct: 62  LLNQEILRVSTLLENASL 79


>gb|ACG35732.1| nucleic acid binding protein [Zea mays]
          Length = 286

 Score =  280 bits (716), Expect = 5e-73
 Identities = 136/152 (89%), Positives = 145/152 (95%)
 Frame = +1

Query: 295 VKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLIRGHGSIKDPVREDMMR 474
           VKKT++VDIP+DKYPTFNFVGR+LGPRGNSLKRVEANT+CRVLIRG GSIKDP RE+MMR
Sbjct: 135 VKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVEANTDCRVLIRGRGSIKDPAREEMMR 194

Query: 475 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDECQDFFKKQQLRELAM 654
           GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDE QD+FKKQQLRELAM
Sbjct: 195 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDYFKKQQLRELAM 254

Query: 655 INGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 750
           +NGTLR+E  Q SGS SPFHNSLGMKRAKTRG
Sbjct: 255 LNGTLREEGMQRSGSASPFHNSLGMKRAKTRG 286



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
 Frame = +3

Query: 33  SGGRYMPYSPSPSNTA-TQNISAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 209
           S GRYM YSPSPS T  +  I+  R+ +AA+ EQ+ YLAELLAERQK+ PF+PV+P S R
Sbjct: 2   SSGRYMAYSPSPSTTPHSPRIAGLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSVR 61

Query: 210 LLNQEI-RIDTFSVSSKL 260
           LLNQEI R+ T   ++ L
Sbjct: 62  LLNQEILRVSTLLENASL 79


>ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea mays]
           gi|194703026|gb|ACF85597.1| unknown [Zea mays]
           gi|413938647|gb|AFW73198.1| nucleic acid binding protein
           [Zea mays]
          Length = 286

 Score =  280 bits (716), Expect = 5e-73
 Identities = 136/152 (89%), Positives = 145/152 (95%)
 Frame = +1

Query: 295 VKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLIRGHGSIKDPVREDMMR 474
           VKKT++VDIP+DKYPTFNFVGR+LGPRGNSLKRVEANT+CRVLIRG GSIKDP RE+MMR
Sbjct: 135 VKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVEANTDCRVLIRGRGSIKDPAREEMMR 194

Query: 475 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDECQDFFKKQQLRELAM 654
           GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDE QD+FKKQQLRELAM
Sbjct: 195 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDYFKKQQLRELAM 254

Query: 655 INGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 750
           +NGTLR+E  Q SGS SPFHNSLGMKRAKTRG
Sbjct: 255 LNGTLREEGMQRSGSASPFHNSLGMKRAKTRG 286



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
 Frame = +3

Query: 33  SGGRYMPYSPSPSNTA-TQNISAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 209
           S GRYM YSPSPS T  +  I+  R+ +AA+ EQ+ YLAELLAERQK+ PF+PV+P S R
Sbjct: 2   SSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERQKLGPFVPVIPHSVR 61

Query: 210 LLNQEI-RIDTFSVSSKL 260
           LLNQEI R+ T   ++ L
Sbjct: 62  LLNQEILRVSTLLENASL 79


>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 291

 Score =  280 bits (715), Expect = 6e-73
 Identities = 137/152 (90%), Positives = 145/152 (95%)
 Frame = +1

Query: 295 VKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLIRGHGSIKDPVREDMMR 474
           VKKT+RVDIP+D YP FNFVGRLLGPRGNSLKRVEA+TECRVLIRG GSIKDP RE+MMR
Sbjct: 140 VKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 199

Query: 475 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDECQDFFKKQQLRELAM 654
           GKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLLKPVDE QDF+KKQQLRELAM
Sbjct: 200 GKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESQDFYKKQQLRELAM 259

Query: 655 INGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 750
           +NGTLR+E S MSGSVSPFHNSLGMKRAKTRG
Sbjct: 260 LNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 38/66 (57%), Positives = 44/66 (66%)
 Frame = +3

Query: 30  SSGGRYMPYSPSPSNTATQNISAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 209
           S  GRYM + PSPS   + ++S  RST   L + D YLAELL ER K+SPFM VLP  FR
Sbjct: 5   SGAGRYMAFPPSPSAPPSPHLSGLRSTP--LSDPDKYLAELLGERNKLSPFMAVLPHCFR 62

Query: 210 LLNQEI 227
           L NQEI
Sbjct: 63  LFNQEI 68


>ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 292

 Score =  278 bits (712), Expect = 1e-72
 Identities = 136/152 (89%), Positives = 145/152 (95%)
 Frame = +1

Query: 295 VKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLIRGHGSIKDPVREDMMR 474
           VKKT+RVDIP+D YP FNFVGRLLGPRGNSLKRVEA+TECRVLIRG GSIKDP RE+MMR
Sbjct: 141 VKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR 200

Query: 475 GKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDECQDFFKKQQLRELAM 654
           GKPGYEHLNEPLHILVEAELPVEI+DARLMQAR+ILEDLLKPVDE QDF+KKQQLRELAM
Sbjct: 201 GKPGYEHLNEPLHILVEAELPVEIVDARLMQARDILEDLLKPVDESQDFYKKQQLRELAM 260

Query: 655 INGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 750
           +NGTLR+E S MSGSVSPFHNSLGMKRAKTRG
Sbjct: 261 LNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 292



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
 Frame = +3

Query: 24  IMSSGG--RYMPYSPSPSNTATQNIS-AFRSTAAALVEQDNYLAELLAERQKISPFMPVL 194
           +MSS G  RYM + PSPS   + ++S A RST   L + D YL ELL ER K+SPFM VL
Sbjct: 1   MMSSSGAARYMAFPPSPSAPPSPHLSGALRSTP--LSDPDKYLTELLGERNKLSPFMAVL 58

Query: 195 PISFRLLNQEI 227
           P  FRLLNQEI
Sbjct: 59  PHCFRLLNQEI 69