BLASTX nr result

ID: Coptis23_contig00021701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021701
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528642.1| 3-deoxy-d-manno-octulosonic-acid transferase...    91   7e-17
ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...    90   2e-16
ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...    90   2e-16
emb|CBI30224.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...    86   3e-15

>ref|XP_002528642.1| 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus
           communis] gi|223531931|gb|EEF33745.1|
           3-deoxy-d-manno-octulosonic-acid transferase, putative
           [Ricinus communis]
          Length = 446

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 40/54 (74%), Positives = 48/54 (88%)
 Frame = -3

Query: 162 VIKDRLPADVIYQFAPLDTPAAVDAFLKYWSPNVVVLLESELWPNLILGASRKG 1
           VIK++LP  V+YQF+PLDTPAAVD FL YW PN +V+LESELWPNLI+G+SRKG
Sbjct: 104 VIKNQLPNGVLYQFSPLDTPAAVDNFLDYWKPNAIVILESELWPNLIMGSSRKG 157


>ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like,
           partial [Cucumis sativus]
          Length = 290

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/54 (70%), Positives = 48/54 (88%)
 Frame = -3

Query: 162 VIKDRLPADVIYQFAPLDTPAAVDAFLKYWSPNVVVLLESELWPNLILGASRKG 1
           V+K+ LP DVIYQFAPLDT AA+D F++YW P V++L+ESELWPNLILGAS++G
Sbjct: 99  VVKNCLPTDVIYQFAPLDTAAAIDTFIEYWKPKVIILMESELWPNLILGASQRG 152


>ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like
           [Cucumis sativus]
          Length = 442

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/54 (70%), Positives = 48/54 (88%)
 Frame = -3

Query: 162 VIKDRLPADVIYQFAPLDTPAAVDAFLKYWSPNVVVLLESELWPNLILGASRKG 1
           V+K+ LP DVIYQFAPLDT AA+D F++YW P V++L+ESELWPNLILGAS++G
Sbjct: 100 VVKNCLPTDVIYQFAPLDTAAAIDTFIEYWKPKVIILMESELWPNLILGASQRG 153


>emb|CBI30224.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -3

Query: 162 VIKDRLPADVIYQFAPLDTPAAVDAFLKYWSPNVVVLLESELWPNLILGASRKG 1
           +I ++LP  VIYQFAPLD PAA+DAFL YW PN V+L+E ELWPNLILGA+R G
Sbjct: 100 IITNQLPTGVIYQFAPLDIPAAMDAFLGYWKPNAVMLMECELWPNLILGAARNG 153


>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
           vinifera]
          Length = 441

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -3

Query: 162 VIKDRLPADVIYQFAPLDTPAAVDAFLKYWSPNVVVLLESELWPNLILGASRKG 1
           +I ++LP  VIYQFAPLD PAA+DAFL YW PN V+L+E ELWPNLILGA+R G
Sbjct: 100 IITNQLPTGVIYQFAPLDIPAAMDAFLGYWKPNAVMLMECELWPNLILGAARNG 153


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