BLASTX nr result

ID: Coptis23_contig00021693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021693
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308844.1| predicted protein [Populus trichocarpa] gi|2...   225   8e-57
ref|XP_002278843.1| PREDICTED: l-2-hydroxyglutarate dehydrogenas...   224   1e-56
ref|XP_003618905.1| L-2-hydroxyglutarate dehydrogenase [Medicago...   221   1e-55
ref|XP_002527381.1| NAD dehydrogenase, putative [Ricinus communi...   216   4e-54
gb|ABO41837.1| putative FAD-dependent oxidoreductase [Gossypium ...   215   8e-54

>ref|XP_002308844.1| predicted protein [Populus trichocarpa] gi|222854820|gb|EEE92367.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  225 bits (573), Expect = 8e-57
 Identities = 104/140 (74%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = -2

Query: 700 KTPPFEHLIYPIPEDGGLEVEFTMDLDGHVKFRPDVEWIGELDCFSSFLNKFDYSVSSDR 521
           K PPFEHLIYPIPEDGGL V  T+DLDGH+KF PDVEWI  +D  SSFLNK+DYSVS+ R
Sbjct: 289 KVPPFEHLIYPIPEDGGLGVHVTLDLDGHLKFGPDVEWIDGIDDVSSFLNKYDYSVSASR 348

Query: 520 VQKFYPEIRRYYPNLKDGSLEPGYAGIRPKLSGPGQPHVDFII-QGEDIHGVRGVINLFG 344
            ++FYPEIR+YYPNLKDGSL+PGY+GIRPK+SGP Q  +DF+I QGEDIHGV G++NLFG
Sbjct: 349 AERFYPEIRKYYPNLKDGSLQPGYSGIRPKISGPRQSPIDFVIQQGEDIHGVPGLVNLFG 408

Query: 343 IESPGLTSSLAIAEHIGLKF 284
           IESPGLT+S+AIAEHI  +F
Sbjct: 409 IESPGLTASMAIAEHIASRF 428


>ref|XP_002278843.1| PREDICTED: l-2-hydroxyglutarate dehydrogenase, mitochondrial [Vitis
           vinifera] gi|297741744|emb|CBI32876.3| unnamed protein
           product [Vitis vinifera]
          Length = 424

 Score =  224 bits (572), Expect = 1e-56
 Identities = 106/139 (76%), Positives = 119/139 (85%)
 Frame = -2

Query: 700 KTPPFEHLIYPIPEDGGLEVEFTMDLDGHVKFRPDVEWIGELDCFSSFLNKFDYSVSSDR 521
           KTPPF+HLIYPIPEDGGL V  T+DLDG +KF PDVEWI   D  SSFLNKFDYSV + R
Sbjct: 284 KTPPFKHLIYPIPEDGGLGVHVTLDLDGQIKFGPDVEWINGADDISSFLNKFDYSVCAKR 343

Query: 520 VQKFYPEIRRYYPNLKDGSLEPGYAGIRPKLSGPGQPHVDFIIQGEDIHGVRGVINLFGI 341
           V++FYPEIR+YYPNLKD SLEPGYAGIRPKLSG  Q  VDF+IQGEDIHGV G++NLFGI
Sbjct: 344 VERFYPEIRKYYPNLKDDSLEPGYAGIRPKLSGAQQSAVDFVIQGEDIHGVPGLVNLFGI 403

Query: 340 ESPGLTSSLAIAEHIGLKF 284
           ESPGLTSS+AIAEHI  ++
Sbjct: 404 ESPGLTSSMAIAEHIVARY 422


>ref|XP_003618905.1| L-2-hydroxyglutarate dehydrogenase [Medicago truncatula]
           gi|355493920|gb|AES75123.1| L-2-hydroxyglutarate
           dehydrogenase [Medicago truncatula]
          Length = 483

 Score =  221 bits (562), Expect = 1e-55
 Identities = 106/139 (76%), Positives = 117/139 (84%)
 Frame = -2

Query: 700 KTPPFEHLIYPIPEDGGLEVEFTMDLDGHVKFRPDVEWIGELDCFSSFLNKFDYSVSSDR 521
           K  PF HLIYPIPEDGGL V  T+DL+G VKF PDVEWI  +D  SSF NKFDYSV ++R
Sbjct: 344 KASPFRHLIYPIPEDGGLGVHVTLDLNGQVKFGPDVEWIDGVDDISSFQNKFDYSVQANR 403

Query: 520 VQKFYPEIRRYYPNLKDGSLEPGYAGIRPKLSGPGQPHVDFIIQGEDIHGVRGVINLFGI 341
            +KFYPEIR+YYPNLKDGSLEPGY+GIRPKLSGP Q  VDF+IQGEDIHGV G+INLFGI
Sbjct: 404 AEKFYPEIRKYYPNLKDGSLEPGYSGIRPKLSGPCQSPVDFVIQGEDIHGVPGLINLFGI 463

Query: 340 ESPGLTSSLAIAEHIGLKF 284
           ESPGLTSSLAIA+ I  KF
Sbjct: 464 ESPGLTSSLAIADFISTKF 482


>ref|XP_002527381.1| NAD dehydrogenase, putative [Ricinus communis]
           gi|223533252|gb|EEF35006.1| NAD dehydrogenase, putative
           [Ricinus communis]
          Length = 417

 Score =  216 bits (550), Expect = 4e-54
 Identities = 100/139 (71%), Positives = 121/139 (87%)
 Frame = -2

Query: 700 KTPPFEHLIYPIPEDGGLEVEFTMDLDGHVKFRPDVEWIGELDCFSSFLNKFDYSVSSDR 521
           + PPF+HLIYPIPEDGGL V  T+DLDG VKF PDVEWI  ++  SSFL+++DY+VS+ R
Sbjct: 277 RIPPFQHLIYPIPEDGGLGVHVTLDLDGQVKFGPDVEWIHGIEDISSFLDRYDYTVSAHR 336

Query: 520 VQKFYPEIRRYYPNLKDGSLEPGYAGIRPKLSGPGQPHVDFIIQGEDIHGVRGVINLFGI 341
           V++FYPEIR+YYPNLK G+LE GYAGIRPK+SGPGQ  +DF+IQGEDIHGV G+INLFGI
Sbjct: 337 VERFYPEIRKYYPNLKTGTLEIGYAGIRPKVSGPGQAPMDFVIQGEDIHGVPGLINLFGI 396

Query: 340 ESPGLTSSLAIAEHIGLKF 284
           ESPGLTSS+AIAE+I  +F
Sbjct: 397 ESPGLTSSMAIAEYIASRF 415


>gb|ABO41837.1| putative FAD-dependent oxidoreductase [Gossypium arboreum]
          Length = 423

 Score =  215 bits (547), Expect = 8e-54
 Identities = 100/139 (71%), Positives = 116/139 (83%)
 Frame = -2

Query: 694 PPFEHLIYPIPEDGGLEVEFTMDLDGHVKFRPDVEWIGELDCFSSFLNKFDYSVSSDRVQ 515
           PPF+HLIYP+PE+GGL V  T+DLDG +KF PDVEWI  +   ++FLNKFDYSVS DRV 
Sbjct: 284 PPFKHLIYPVPEEGGLGVHVTLDLDGQLKFGPDVEWIPHVPDTTNFLNKFDYSVSVDRVA 343

Query: 514 KFYPEIRRYYPNLKDGSLEPGYAGIRPKLSGPGQPHVDFIIQGEDIHGVRGVINLFGIES 335
           +FYPEIR+YYPNLKDGSL PGYAGIRPKL GPGQ   DF+IQGEDIHGV G++NLFGIES
Sbjct: 344 RFYPEIRKYYPNLKDGSLIPGYAGIRPKLHGPGQSACDFVIQGEDIHGVGGLVNLFGIES 403

Query: 334 PGLTSSLAIAEHIGLKFAG 278
           PGLTSS+AIAE++     G
Sbjct: 404 PGLTSSMAIAEYVAALLLG 422


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