BLASTX nr result

ID: Coptis23_contig00021683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021683
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
emb|CBI27815.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244...    90   2e-16
ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...    89   5e-16

>ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|222855440|gb|EEE92987.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +1

Query: 1   AVGYIVDGCLSLRLIKLFGCTQISNAFLDGHSNPFVRIIGLKTTPILEHLSVFDPLEGPL 180
           A+G IVD CLSL+L+KLFGCTQI+ AFL+GHSNP VRIIG KT P+LEHL   +P E PL
Sbjct: 120 ALGMIVDSCLSLKLLKLFGCTQITEAFLNGHSNPMVRIIGCKTGPVLEHLDALEPQENPL 179

Query: 181 RYS 189
           RYS
Sbjct: 180 RYS 182


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = +1

Query: 4   VGYIVDGCLSLRLIKLFGCTQISNAFLDGHSNPFVRIIGLKTTPILEHLSVFDPLEGPL 180
           +G+IVD CLSLR++KLFGCTQI+N F+DGHSNP V IIGLK TPIL+HL + DP   PL
Sbjct: 774 LGFIVDSCLSLRVLKLFGCTQITNMFVDGHSNPQVEIIGLKLTPILKHLKLTDPQSFPL 832


>ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244043 [Vitis vinifera]
          Length = 905

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = +1

Query: 4    VGYIVDGCLSLRLIKLFGCTQISNAFLDGHSNPFVRIIGLKTTPILEHLSVFDPLEGPL 180
            +G+IVD CLSLR++KLFGCTQI+N F+DGHSNP V IIGLK TPIL+HL + DP   PL
Sbjct: 847  LGFIVDSCLSLRVLKLFGCTQITNMFVDGHSNPQVEIIGLKLTPILKHLKLTDPQSFPL 905


>ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|222833315|gb|EEE71792.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/65 (64%), Positives = 54/65 (83%)
 Frame = +1

Query: 1   AVGYIVDGCLSLRLIKLFGCTQISNAFLDGHSNPFVRIIGLKTTPILEHLSVFDPLEGPL 180
           A+G IVD CLSL+++KLFGC+Q++N FLDGHSN  V+IIGLKT+P+LEH+ V +  E  L
Sbjct: 191 ALGLIVDSCLSLKVLKLFGCSQVTNVFLDGHSNSDVQIIGLKTSPVLEHIRVPELQEFAL 250

Query: 181 RYSSV 195
           RYSSV
Sbjct: 251 RYSSV 255


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   AVGYIVDGCLSLRLIKLFGCTQISNAFLDGHSNPFVRIIGLKTTPILEHLSVFDPLEGPL 180
           A+G IVD CL+LR +KLFGC+Q+++AFL+GHSN  ++IIGLK +P+LEH+ V DP +G L
Sbjct: 472 ALGLIVDSCLALRSLKLFGCSQVTDAFLNGHSNLQIQIIGLKMSPVLEHVKVPDPHQGAL 531

Query: 181 RYSSVPI 201
            YSSV +
Sbjct: 532 NYSSVSV 538


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