BLASTX nr result

ID: Coptis23_contig00021647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021647
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...   311   9e-83
emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]   311   9e-83
ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, pu...   296   5e-78
emb|CBI24338.3| unnamed protein product [Vitis vinifera]              290   3e-76
ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|2...   285   9e-75

>ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis
           vinifera]
          Length = 269

 Score =  311 bits (798), Expect = 9e-83
 Identities = 152/227 (66%), Positives = 178/227 (78%)
 Frame = -2

Query: 829 EQQQPWAPTDLEIDVERESKLMQKMQISIRKLESSDFYTTFLDQMETLEVLTYFLRILGS 650
           + QQPWAPTDLE+D+ RESKLMQK+QI IRKL +S FY   LDQ++T  +L  FLR+LGS
Sbjct: 41  QHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGS 100

Query: 649 ETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTIETNVLEALGC 470
           E KMQMV+YGIGSIESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS  E+ VLEALGC
Sbjct: 101 ELKMQMVVYGIGSIESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGC 160

Query: 469 TVLKVNEQGRRQAVKPTMFFMPHCEAVLYDNLLQANWRPENLNQMVLFGNSFEKYEQYVS 290
           +VL VNEQGRRQA KPT+FFMPHCEA LYDNLLQ NWR E +N +VLFGNSF  YEQ+VS
Sbjct: 161 SVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVS 220

Query: 289 EFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFHDSSWHFFKL 149
           EF++S +VDS+R +L                 +F AFHDSSWHFF L
Sbjct: 221 EFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 267


>emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]
          Length = 269

 Score =  311 bits (798), Expect = 9e-83
 Identities = 152/227 (66%), Positives = 178/227 (78%)
 Frame = -2

Query: 829 EQQQPWAPTDLEIDVERESKLMQKMQISIRKLESSDFYTTFLDQMETLEVLTYFLRILGS 650
           + QQPWAPTDLE+D+ RESKLMQK+QI IRKL +S FY   LDQ++T  +L  FLR+LGS
Sbjct: 41  QHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGS 100

Query: 649 ETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTIETNVLEALGC 470
           E KMQMV+YGIGSIESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS  E+ VLEALGC
Sbjct: 101 ELKMQMVVYGIGSIESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGC 160

Query: 469 TVLKVNEQGRRQAVKPTMFFMPHCEAVLYDNLLQANWRPENLNQMVLFGNSFEKYEQYVS 290
           +VL VNEQGRRQA KPT+FFMPHCEA LYDNLLQ NWR E +N +VLFGNSF  YEQ+VS
Sbjct: 161 SVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVS 220

Query: 289 EFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFHDSSWHFFKL 149
           EF++S +VDS+R +L                 +F AFHDSSWHFF L
Sbjct: 221 EFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 267


>ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis] gi|223539889|gb|EEF41468.1| Protein
           SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis]
          Length = 276

 Score =  296 bits (757), Expect = 5e-78
 Identities = 145/234 (61%), Positives = 178/234 (76%)
 Frame = -2

Query: 829 EQQQPWAPTDLEIDVERESKLMQKMQISIRKLESSDFYTTFLDQMETLEVLTYFLRILGS 650
           EQQQPW P DLE D  R+SKL++KM I ++K+E+S FY T L+Q++T E L  F ++LGS
Sbjct: 40  EQQQPWVPADLESDSNRQSKLIEKMNICMKKVENSQFYQTLLEQIQTPESLDSFHKVLGS 99

Query: 649 ETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTIETNVLEALGC 470
           E KMQMVIYGIGSIESY+ PR+QLS AIL+K++F WIGDIEVFDPVLS  E+ VLEALGC
Sbjct: 100 ELKMQMVIYGIGSIESYETPRIQLSVAILMKKEFSWIGDIEVFDPVLSATESRVLEALGC 159

Query: 469 TVLKVNEQGRRQAVKPTMFFMPHCEAVLYDNLLQANWRPENLNQMVLFGNSFEKYEQYVS 290
           +VL VNE GRR   +PT+F+MPHCEA LY+NLLQANWR E LN++ LFGNSFE Y QY+S
Sbjct: 160 SVLSVNEHGRRCVTRPTLFYMPHCEAELYNNLLQANWRVELLNRIALFGNSFEVY-QYLS 218

Query: 289 EFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFHDSSWHFFKLDPQMELE 128
           EF+NS IVDS+R ++                 +F AFHDSSWHFF  DP+ EL+
Sbjct: 219 EFRNSTIVDSSRHIVAVREFTHEYVIKTVSDDYFAAFHDSSWHFFSPDPKTELQ 272


>emb|CBI24338.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  290 bits (742), Expect = 3e-76
 Identities = 145/227 (63%), Positives = 170/227 (74%)
 Frame = -2

Query: 829 EQQQPWAPTDLEIDVERESKLMQKMQISIRKLESSDFYTTFLDQMETLEVLTYFLRILGS 650
           + QQPWAPTDLE+D+ RESKLMQK+QI IRKL +S FY   LDQ++T  +L  FLR    
Sbjct: 41  QHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLR---- 96

Query: 649 ETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTIETNVLEALGC 470
                MV+YGIGSIESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS  E+ VLEALGC
Sbjct: 97  -----MVVYGIGSIESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGC 151

Query: 469 TVLKVNEQGRRQAVKPTMFFMPHCEAVLYDNLLQANWRPENLNQMVLFGNSFEKYEQYVS 290
           +VL VNEQGRRQA KPT+FFMPHCEA LYDNLLQ NWR E +N +VLFGNSF  YEQ+VS
Sbjct: 152 SVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVS 211

Query: 289 EFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFHDSSWHFFKL 149
           EF++S +VDS+R +L                 +F AFHDSSWHFF L
Sbjct: 212 EFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 258


>ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|222842223|gb|EEE79770.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  285 bits (729), Expect = 9e-75
 Identities = 144/238 (60%), Positives = 174/238 (73%)
 Frame = -2

Query: 826 QQQPWAPTDLEIDVERESKLMQKMQISIRKLESSDFYTTFLDQMETLEVLTYFLRILGSE 647
           +QQPW PT+LE D ERE+KL+QKM+  I+K+ESS FY  FL+Q+E  E+L  F R+LG E
Sbjct: 42  EQQPWVPTELESDPEREAKLIQKMEFCIKKVESSRFYQNFLEQVENPEILDSFHRVLGFE 101

Query: 646 TKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTIETNVLEALGCT 467
            KM MVIYGIGSIESY+ PR QLS AIL+KRKF WIGDIEVFDP+LS  E+ VLE+LGC+
Sbjct: 102 LKMPMVIYGIGSIESYETPRFQLSLAILMKRKFCWIGDIEVFDPILSATESRVLESLGCS 161

Query: 466 VLKVNEQGRRQAVKPTMFFMPHCEAVLYDNLLQANWRPENLNQMVLFGNSFEKYEQYVSE 287
           VL VNEQGRR+A KP +F+MPHCEA LY+NLLQANW  E LN +VLFGNSFE YE + SE
Sbjct: 162 VLSVNEQGRRRATKPMLFYMPHCEAGLYNNLLQANWELELLNHIVLFGNSFEMYE-FFSE 220

Query: 286 FKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFHDSSWHFFKLDPQMELEFETLK 113
            KNS++V+S   VL                 +F AFHDSSWHFF   P ++ E   +K
Sbjct: 221 IKNSIVVESTMHVLAARKFANEYVIKTASDDYFAAFHDSSWHFF--SPALDTELLLVK 276


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