BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021645
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   262   2e-68
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   261   4e-68
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor...   258   3e-67
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...   258   3e-67
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   258   4e-67

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  262 bits (670), Expect = 2e-68
 Identities = 133/140 (95%), Positives = 136/140 (97%)
 Frame = -1

Query: 422  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKA 243
            VITPISQASAKQRAGRAGRTGPGKCYRLYTESAY NEMS TSIPEIQRINLGFTTLTMKA
Sbjct: 834  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 893

Query: 242  MGINDLLSFDFMDPPSPQALISAMEQLYSIGALDDEGLLTNLGKKMAEFPLDPPLSKMLL 63
            MGINDLLSFDFMDPPSPQALISAMEQLYS+GALD+EGLLT LG+KMAEFPLDPPLSKMLL
Sbjct: 894  MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLL 953

Query: 62   ASVDLRCSDEILTIIAMIQT 3
            ASVDL CSDEILTIIAMIQT
Sbjct: 954  ASVDLGCSDEILTIIAMIQT 973


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  261 bits (667), Expect = 4e-68
 Identities = 132/140 (94%), Positives = 136/140 (97%)
 Frame = -1

Query: 422  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKA 243
            VITPISQASAKQRAGRAGRTGPGKCYRLYTESAY NEMS TSIPEIQRINLGFTTLTMKA
Sbjct: 828  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 887

Query: 242  MGINDLLSFDFMDPPSPQALISAMEQLYSIGALDDEGLLTNLGKKMAEFPLDPPLSKMLL 63
            MGINDLLSFDFMDPPSPQALISAMEQLYS+GALD+EGLLT LG+KMAEFPLDPPLSKMLL
Sbjct: 888  MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLL 947

Query: 62   ASVDLRCSDEILTIIAMIQT 3
            ASVDL CSDEILT+IAMIQT
Sbjct: 948  ASVDLGCSDEILTMIAMIQT 967


>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Cucumis sativus]
          Length = 1181

 Score =  258 bits (660), Expect = 3e-67
 Identities = 131/140 (93%), Positives = 135/140 (96%)
 Frame = -1

Query: 422  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKA 243
            VITPISQASAKQRAGRAGRTGPGKCYRLYTESAY NEMS T+IPEIQRINLG TTLTMKA
Sbjct: 838  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKA 897

Query: 242  MGINDLLSFDFMDPPSPQALISAMEQLYSIGALDDEGLLTNLGKKMAEFPLDPPLSKMLL 63
            MGINDLLSFDFMDPPSPQALISAMEQLYS+GALD+EGLLT LG+KMAEFPLDPPLSKMLL
Sbjct: 898  MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLL 957

Query: 62   ASVDLRCSDEILTIIAMIQT 3
            ASVDL CSDEILTIIAMIQT
Sbjct: 958  ASVDLGCSDEILTIIAMIQT 977


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score =  258 bits (660), Expect = 3e-67
 Identities = 131/140 (93%), Positives = 135/140 (96%)
 Frame = -1

Query: 422  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKA 243
            VITPISQASAKQRAGRAGRTGPGKCYRLYTESAY NEMS T+IPEIQRINLG TTLTMKA
Sbjct: 875  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKA 934

Query: 242  MGINDLLSFDFMDPPSPQALISAMEQLYSIGALDDEGLLTNLGKKMAEFPLDPPLSKMLL 63
            MGINDLLSFDFMDPPSPQALISAMEQLYS+GALD+EGLLT LG+KMAEFPLDPPLSKMLL
Sbjct: 935  MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLL 994

Query: 62   ASVDLRCSDEILTIIAMIQT 3
            ASVDL CSDEILTIIAMIQT
Sbjct: 995  ASVDLGCSDEILTIIAMIQT 1014


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  258 bits (659), Expect = 4e-67
 Identities = 130/140 (92%), Positives = 135/140 (96%)
 Frame = -1

Query: 422  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYHNEMSHTSIPEIQRINLGFTTLTMKA 243
            VITPISQASAKQRAGRAGRTGPGKCYRLYTESAY NEMS TS+PEIQRINLG TTLTMKA
Sbjct: 829  VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGLTTLTMKA 888

Query: 242  MGINDLLSFDFMDPPSPQALISAMEQLYSIGALDDEGLLTNLGKKMAEFPLDPPLSKMLL 63
            MGINDLLSFDFMDPPSPQALISAMEQLYS+GALD+EGLLT LG+KMAEFPL+PPLSKMLL
Sbjct: 889  MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLL 948

Query: 62   ASVDLRCSDEILTIIAMIQT 3
            ASVDL CSDEILTIIAMIQT
Sbjct: 949  ASVDLGCSDEILTIIAMIQT 968