BLASTX nr result

ID: Coptis23_contig00021632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021632
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34053.3| unnamed protein product [Vitis vinifera]              162   6e-38
ref|XP_002265069.1| PREDICTED: lysine-specific histone demethyla...   160   1e-37
ref|XP_002529806.1| Flavin-containing amine oxidase domain-conta...   148   7e-34
ref|XP_002300664.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33
ref|XP_003533370.1| PREDICTED: lysine-specific histone demethyla...   137   1e-30

>emb|CBI34053.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  162 bits (409), Expect = 6e-38
 Identities = 82/120 (68%), Positives = 101/120 (84%), Gaps = 5/120 (4%)
 Frame = -1

Query: 616 SKSSSKLMDQIISLQIN-----STKNRKRRKMADNLAKEVDIEALIALSVGFPVDSLTEE 452
           S +++K+MD II +QIN     S  +R+RR++AD LAKEVD+EAL+A+SVGFPVDSLTEE
Sbjct: 63  SSAAAKIMDDIIGMQINDSPALSKTHRRRRRIAD-LAKEVDVEALVAISVGFPVDSLTEE 121

Query: 451 EIEYNVVSYLGGVEQSNYIVVRNHILARWRSNVDTWMTRDHALESIRSEHKGLVNLAYSF 272
           EIE NVV+ +GG EQ+NYIVVRNHILARWR +V TW+TRDHA+ESIRSEH+  VN AYSF
Sbjct: 122 EIEANVVTAIGGAEQANYIVVRNHILARWRWSVSTWLTRDHAMESIRSEHRNSVNSAYSF 181


>ref|XP_002265069.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Vitis
           vinifera]
          Length = 677

 Score =  160 bits (406), Expect = 1e-37
 Identities = 82/117 (70%), Positives = 98/117 (83%), Gaps = 5/117 (4%)
 Frame = -1

Query: 607 SSKLMDQIISLQIN-----STKNRKRRKMADNLAKEVDIEALIALSVGFPVDSLTEEEIE 443
           S K+MD II +QIN     S  +R+RR++AD LAKEVD+EAL+A+SVGFPVDSLTEEEIE
Sbjct: 84  SEKIMDDIIGMQINDSPALSKTHRRRRRIAD-LAKEVDVEALVAISVGFPVDSLTEEEIE 142

Query: 442 YNVVSYLGGVEQSNYIVVRNHILARWRSNVDTWMTRDHALESIRSEHKGLVNLAYSF 272
            NVV+ +GG EQ+NYIVVRNHILARWR +V TW+TRDHA+ESIRSEH+  VN AYSF
Sbjct: 143 ANVVTAIGGAEQANYIVVRNHILARWRWSVSTWLTRDHAMESIRSEHRNSVNSAYSF 199


>ref|XP_002529806.1| Flavin-containing amine oxidase domain-containing protein, putative
           [Ricinus communis] gi|223530717|gb|EEF32588.1|
           Flavin-containing amine oxidase domain-containing
           protein, putative [Ricinus communis]
          Length = 793

 Score =  148 bits (374), Expect = 7e-34
 Identities = 72/101 (71%), Positives = 86/101 (85%)
 Frame = -1

Query: 574 QINSTKNRKRRKMADNLAKEVDIEALIALSVGFPVDSLTEEEIEYNVVSYLGGVEQSNYI 395
           +IN+  + +R ++A  LAKEVD+EALIA+SVGFPVDSL+EEEIE NVVS +GG EQSNYI
Sbjct: 98  EINANPSFRRHRVAGGLAKEVDVEALIAISVGFPVDSLSEEEIEANVVSTIGGTEQSNYI 157

Query: 394 VVRNHILARWRSNVDTWMTRDHALESIRSEHKGLVNLAYSF 272
           VVRNHILARWR NV  W+TR+HALESIR+EHK LV+ AY F
Sbjct: 158 VVRNHILARWRWNVSIWLTREHALESIRAEHKNLVDSAYDF 198


>ref|XP_002300664.1| predicted protein [Populus trichocarpa] gi|222842390|gb|EEE79937.1|
           predicted protein [Populus trichocarpa]
          Length = 795

 Score =  146 bits (369), Expect = 3e-33
 Identities = 70/101 (69%), Positives = 85/101 (84%)
 Frame = -1

Query: 574 QINSTKNRKRRKMADNLAKEVDIEALIALSVGFPVDSLTEEEIEYNVVSYLGGVEQSNYI 395
           +IN     +R ++   L+KEVD+EALIA+SVGFPVDSLTEEEIE NVVS +GG EQ+NYI
Sbjct: 97  EINGNPPFRRHRIGGGLSKEVDVEALIAISVGFPVDSLTEEEIEANVVSTIGGTEQANYI 156

Query: 394 VVRNHILARWRSNVDTWMTRDHALESIRSEHKGLVNLAYSF 272
           VVRNHIL+RWRS+V  W+TRDHALESIR+EHK LV+ AY+F
Sbjct: 157 VVRNHILSRWRSSVSVWLTRDHALESIRAEHKALVDSAYNF 197


>ref|XP_003533370.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like
           [Glycine max]
          Length = 1388

 Score =  137 bits (346), Expect = 1e-30
 Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 11/107 (10%)
 Frame = -1

Query: 559 KNRKRRKM-----------ADNLAKEVDIEALIALSVGFPVDSLTEEEIEYNVVSYLGGV 413
           K R+R+K             +++AK+ D+EALIA+SVGFPVDSLTEEEIE NVVS +GG 
Sbjct: 672 KRRRRKKFFTELTTGPSTRRNDVAKDCDVEALIAISVGFPVDSLTEEEIEANVVSTVGGS 731

Query: 412 EQSNYIVVRNHILARWRSNVDTWMTRDHALESIRSEHKGLVNLAYSF 272
           EQSNYIVVRNHILARWRSNV  W+T D AL SIRSEHKGLV  AY F
Sbjct: 732 EQSNYIVVRNHILARWRSNVSVWLTHDRALRSIRSEHKGLVETAYRF 778


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