BLASTX nr result

ID: Coptis23_contig00021620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021620
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273903.1| PREDICTED: putative GDP-L-fucose synthase 2-...   152   2e-35
emb|CAN61442.1| hypothetical protein VITISV_037626 [Vitis vinifera]   152   2e-35
ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula] ...   150   1e-34
ref|XP_002523849.1| fucose synthetase, putative [Ricinus communi...   148   4e-34

>ref|XP_002273903.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Vitis vinifera]
          Length = 324

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/82 (87%), Positives = 79/82 (96%)
 Frame = -3

Query: 420 YSGLEHVNIGSGKEVSIKELAELVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWV 241
           YSGL HVN+GSGKEV+IKELAELVKEVVGF+GELVWD+SKPDGTPRKLMDSSKLA LGWV
Sbjct: 243 YSGLVHVNVGSGKEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLAELGWV 302

Query: 240 PKISLRDGLVDTYKWYLEYVKQ 175
           PKI+L++GLVDTYKWYLE VKQ
Sbjct: 303 PKIALKEGLVDTYKWYLENVKQ 324


>emb|CAN61442.1| hypothetical protein VITISV_037626 [Vitis vinifera]
          Length = 324

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/82 (87%), Positives = 79/82 (96%)
 Frame = -3

Query: 420 YSGLEHVNIGSGKEVSIKELAELVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWV 241
           YSGL HVN+GSGKEV+IKELAELVKEVVGF+GELVWD+SKPDGTPRKLMDSSKLA LGWV
Sbjct: 243 YSGLVHVNVGSGKEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLAELGWV 302

Query: 240 PKISLRDGLVDTYKWYLEYVKQ 175
           PKI+L++GLVDTYKWYLE VKQ
Sbjct: 303 PKIALKEGLVDTYKWYLENVKQ 324


>ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|222865949|gb|EEF03080.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/80 (86%), Positives = 77/80 (96%)
 Frame = -3

Query: 420 YSGLEHVNIGSGKEVSIKELAELVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWV 241
           YSGLEH+N+GSGKEV+IKELAELVKE VGF+GELVWD+SKPDGTPRKLMDSSKL GLGW+
Sbjct: 241 YSGLEHLNVGSGKEVTIKELAELVKEAVGFEGELVWDTSKPDGTPRKLMDSSKLLGLGWM 300

Query: 240 PKISLRDGLVDTYKWYLEYV 181
           PKISL+DGLVDTYKWY+E V
Sbjct: 301 PKISLKDGLVDTYKWYVENV 320


>ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula]
           gi|355500911|gb|AES82114.1| GDP-L-fucose synthase
           [Medicago truncatula]
          Length = 320

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/82 (82%), Positives = 78/82 (95%)
 Frame = -3

Query: 420 YSGLEHVNIGSGKEVSIKELAELVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWV 241
           YSG+EH+N+GSGKEV+IKELAE +KEVVGF+G+LVWDS+KPDGTPRKLMDSSKLA LGW 
Sbjct: 239 YSGVEHLNVGSGKEVTIKELAESMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKLAALGWT 298

Query: 240 PKISLRDGLVDTYKWYLEYVKQ 175
           PK+SL+DGLVDTYKWYLE VKQ
Sbjct: 299 PKVSLKDGLVDTYKWYLENVKQ 320


>ref|XP_002523849.1| fucose synthetase, putative [Ricinus communis]
           gi|223536937|gb|EEF38575.1| fucose synthetase, putative
           [Ricinus communis]
          Length = 321

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -3

Query: 420 YSGLEHVNIGSGKEVSIKELAELVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWV 241
           YSG+EHVN+GSGKEV+IKELAE ++EVVGFQG+LVWDSSKPDGTPRKLMDSSKL GLGW 
Sbjct: 239 YSGIEHVNVGSGKEVTIKELAEQMREVVGFQGQLVWDSSKPDGTPRKLMDSSKLLGLGWS 298

Query: 240 PKISLRDGLVDTYKWYLEYV 181
           PK+SL+DGLVDTYKWYLE V
Sbjct: 299 PKVSLKDGLVDTYKWYLENV 318


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