BLASTX nr result

ID: Coptis23_contig00021616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021616
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase N...   116   1e-23
emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]   116   1e-23
ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase N...   111   4e-22
ref|XP_002526747.1| ATP binding protein, putative [Ricinus commu...   103   8e-20
ref|XP_003520528.1| PREDICTED: serine/threonine-protein kinase N...    76   2e-11

>ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis vinifera]
          Length = 662

 Score =  116 bits (290), Expect = 1e-23
 Identities = 107/330 (32%), Positives = 141/330 (42%), Gaps = 14/330 (4%)
 Frame = -3

Query: 1046 IETKRVDPTSCHHDPYTVDRGLKG---------KGEEEHANPDFIQQLESTDTETSFGGS 894
            +ETKRVDPTS   +        KG           E+E  N   + Q ES DTETS G +
Sbjct: 355  LETKRVDPTSYPEEVSNAVESSKGGSTSCATTITNEDEQVNGILLAQKESLDTETSTGST 414

Query: 893  TITHQEDEEHKSQLKRCEQVEETEVAKKGVSTKESQVRHFEQLIEAEIPTSRMTIEDPLT 714
              +   DE+ + +                    ES  +HF Q+ + +I    +T ED   
Sbjct: 415  PNSQPGDEKEQDE-------------------SESAPKHFAQIQDGDI--KNVTSEDDAM 453

Query: 713  QSSQIVSEEAEKEEVLSSCSQRTAETNGETLRTFFRPSQHEMLSPAISIVVDGDETKHIY 534
            +S+  V   AE E          A        T    S  +  S + S     +   +  
Sbjct: 454  ESNTQVPAGAETESKSLQPGNHGAMATSSANSTDKGGSLDDESSNSSSATQGIEYEPNAE 513

Query: 533  GS---EAIVNPDSNSLSDAR-DNRSSTSTLTLACGDEEANKTPSVFLSQQTKKEGTHEMS 366
             S   + + +PDS +   A+ D  SS S   L C DE   KT +   S    K+  + M+
Sbjct: 514  PSCCLQKMESPDSQAEGGAQIDYISSESNDILPCKDEAGAKTDNTSCSMVMAKDDMNTMN 573

Query: 365  VNHKEXXXXXXXXXXXXTEMQAKWENVSSFRQRADXXXXXXXXXXXXXXQDKLEELANVL 186
                E             E + +W+N S  +QRAD              QDKLEELA VL
Sbjct: 574  KAPSEVSLLSTLTAVGGDETKGEWDNPS--QQRADALESLLELCARLLQQDKLEELAGVL 631

Query: 185  RPFGEEVVSSRETAIWLTKSLMDAQK-LGG 99
            +PFGEE VSSRETAIWLTKSLM AQK LGG
Sbjct: 632  KPFGEEAVSSRETAIWLTKSLMTAQKFLGG 661


>emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]
          Length = 973

 Score =  116 bits (290), Expect = 1e-23
 Identities = 107/330 (32%), Positives = 141/330 (42%), Gaps = 14/330 (4%)
 Frame = -3

Query: 1046 IETKRVDPTSCHHDPYTVDRGLKG---------KGEEEHANPDFIQQLESTDTETSFGGS 894
            +ETKRVDPTS   +        KG           E+E  N   + Q ES DTETS G +
Sbjct: 666  LETKRVDPTSYPEEVSNAVESSKGGSTSCATTITNEDEQVNGILLAQKESLDTETSTGST 725

Query: 893  TITHQEDEEHKSQLKRCEQVEETEVAKKGVSTKESQVRHFEQLIEAEIPTSRMTIEDPLT 714
              +   DE+ + +                    ES  +HF Q+ + +I    +T ED   
Sbjct: 726  PNSQPGDEKEQDE-------------------SESAPKHFAQIQDGDI--KNVTSEDDAM 764

Query: 713  QSSQIVSEEAEKEEVLSSCSQRTAETNGETLRTFFRPSQHEMLSPAISIVVDGDETKHIY 534
            +S+  V   AE E          A        T    S  +  S + S     +   +  
Sbjct: 765  ESNTQVPAGAETESKSLQPGNHGAMATSSANSTDKGGSLDDESSNSSSATQGIEYEPNAE 824

Query: 533  GS---EAIVNPDSNSLSDAR-DNRSSTSTLTLACGDEEANKTPSVFLSQQTKKEGTHEMS 366
             S   + + +PDS +   A+ D  SS S   L C DE   KT +   S    K+  + M+
Sbjct: 825  PSCCLQKMESPDSQAEGGAQIDYISSESNDILPCKDEAGAKTDNTSCSMVMAKDDMNTMN 884

Query: 365  VNHKEXXXXXXXXXXXXTEMQAKWENVSSFRQRADXXXXXXXXXXXXXXQDKLEELANVL 186
                E             E + +W+N S  +QRAD              QDKLEELA VL
Sbjct: 885  KAPSEVSLLSTLTAVGGDETKGEWDNPS--QQRADALESLLELCARLLQQDKLEELAGVL 942

Query: 185  RPFGEEVVSSRETAIWLTKSLMDAQK-LGG 99
            +PFGEE VSSRETAIWLTKSLM AQK LGG
Sbjct: 943  KPFGEEAVSSRETAIWLTKSLMTAQKFLGG 972


>ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis vinifera]
          Length = 597

 Score =  111 bits (277), Expect = 4e-22
 Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 3/353 (0%)
 Frame = -3

Query: 1148 KEVASAGAITGQTRTKTKNVIFSDTLTTSIP-DVRIETKRVDPTSCHHDPYTVDRGLKGK 972
            KE+ +   + G T    +N  ++   T+S   + R+ TKRVDPTSC+      ++GL   
Sbjct: 309  KELENVQLVKGNTDVHKQNPAYNQMPTSSDSLEARVHTKRVDPTSCYDQMPKANKGLV-- 366

Query: 971  GEEEHANPDFIQQLESTDTETSFGGSTITHQEDEEHKSQLKRCEQVEETEVAKKGVSTKE 792
                  +P+F +Q E+++ ET+   ++ THQED E    +  C Q    +V K+G  T E
Sbjct: 367  -----VDPNFTEQTENSNAETASVRTSSTHQEDVEPDELISECAQ----KVKKEGQVTDE 417

Query: 791  --SQVRHFEQLIEAEIPTSRMTIEDPLTQSSQIVSEEAEKEEVLSSCSQRTAETNGETLR 618
              ++    E L    IP S         ++ +I  +E    E++ SC   T E       
Sbjct: 418  ADTEEERLETLYAGPIPPS---------EAMKIAKQE---REIVPSCCLHTME------- 458

Query: 617  TFFRPSQHEMLSPAISIVVDGDETKHIYGSEAIVNPDSNSLSDARDNRSSTSTLTLACGD 438
                                              N  S   + +  N S  ST+TL   +
Sbjct: 459  ----------------------------------NLSSYPANTSMGNSSMESTVTLPSEN 484

Query: 437  EEANKTPSVFLSQQTKKEGTHEMSVNHKEXXXXXXXXXXXXTEMQAKWENVSSFRQRADX 258
            E+  KT ++ +  QT K+G  E++    +                   ++++  +QRA+ 
Sbjct: 485  EQEAKTDTLIIPFQTPKKGARELNRAVSDISSIITPSMLNSNNRSIDLDHLN--QQRAEA 542

Query: 257  XXXXXXXXXXXXXQDKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQKLGG 99
                         Q++LEELA VL+PFGEE VSSRETAIWLTKS+    K  G
Sbjct: 543  LESLLELCARLLRQERLEELAGVLKPFGEEAVSSRETAIWLTKSIASLGKHNG 595


>ref|XP_002526747.1| ATP binding protein, putative [Ricinus communis]
            gi|223533936|gb|EEF35661.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 700

 Score =  103 bits (257), Expect = 8e-20
 Identities = 104/343 (30%), Positives = 145/343 (42%), Gaps = 19/343 (5%)
 Frame = -3

Query: 1070 TTSIPDVRIETKRVDPTSCHHDPYTVDRGLKGKGEEEHANPDFIQQLESTDTETSFGGST 891
            +TS  +  +ETKRVDPTS     YTV+      G ++           STD+ETS     
Sbjct: 400  STSSAEDNLETKRVDPTS-----YTVELSDSMTGPKD----------SSTDSETS----- 439

Query: 890  ITHQEDEEHKSQLKRCEQVEETEVAKKGVSTKESQV----RHFEQLIEAEIPTSRMTIED 723
            + + E +   S L + +  E  E   +   T + +V    +H +QL E ++    +T +D
Sbjct: 440  VCNGEKQSDSSPLAQNDGTE-IEFTLESTLTSQHEVEPTSKHSQQLREVDVKI--VTTKD 496

Query: 722  PLTQSSQIVSEEAEKEEVLSSCSQRTAETNGETLRTFFRPSQHEMLSPAISIVVDGDETK 543
             L    Q V EEA+ EE             G T           +  P++  + D D + 
Sbjct: 497  QLHPCDQKVIEEAQIEE------------GGATTE-----DSRNLAVPSLDCI-DKDTSN 538

Query: 542  HIYGSEAIVN---------------PDSNSLSDARDNRSSTSTLTLACGDEEANKTPSVF 408
               GS   +N               PD  +     D  SS +   L C DE   K P   
Sbjct: 539  DDKGSPTAINEPYIEPERCLQKPESPDVYTEGTHMDYLSSDNIDILPCKDESVAK-PDNN 597

Query: 407  LSQQTKKEGTHEMSVNHKEXXXXXXXXXXXXTEMQAKWENVSSFRQRADXXXXXXXXXXX 228
             S + +K+ +H M     +             E + +WEN    +QRAD           
Sbjct: 598  CSLELEKDDSHGMKPTASQISLLNTLAAMHANETKNEWENPG--QQRADALESLLELCAR 655

Query: 227  XXXQDKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQKLGG 99
               QDK++ELA VL+PFGEEVVSSRETAIWLTKSLM   K  G
Sbjct: 656  LLRQDKIDELAGVLKPFGEEVVSSRETAIWLTKSLMSQHKFNG 698


>ref|XP_003520528.1| PREDICTED: serine/threonine-protein kinase Nek6-like [Glycine max]
          Length = 647

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 95/341 (27%), Positives = 141/341 (41%), Gaps = 14/341 (4%)
 Frame = -3

Query: 1076 TLTTSIPDVRIETKRVDPTSCHHDPYTVDRGLKGKGEEEHANPDFIQQLESTDTETSFGG 897
            T++TS  D  +ET+  D TS     Y V+      G ++           ST +E     
Sbjct: 342  TISTSAED-NLETRMADLTS-----YIVESCTSISGSKDG----------STTSE----- 380

Query: 896  STITHQEDEEHKSQLKRCEQVEETEVAKKGVSTKESQ----------VRHFEQLIEAEIP 747
            STI     E+ KS+  R       E A   +S+K +Q           +HF +L E  I 
Sbjct: 381  STICSVCKEDFKSRPAR-------ETANNEISSKSTQNSMHEKQRFAAKHFHKLEEDNIN 433

Query: 746  TSRMTIEDPLTQSSQIVSEEAEKE----EVLSSCSQRTAETNGETLRTFFRPSQHEMLSP 579
             +   +ED       + S EA++E    E     +  +A ++ +  ++    S   ++ P
Sbjct: 434  VATTEVEDASCNEG-LDSAEAQREDSNFEDSGKSTMSSAGSSTDKDKSINEESSSLIMHP 492

Query: 578  AISIVVDGDETKHIYGSEAIVNPDSNSLSDARDNRSSTSTLTLACGDEEANKTPSVFLSQ 399
             I +  D +   H   S+    PD  +     +  +S S   L   D++     +V +  
Sbjct: 493  -IRVEHDTESGNH---SKKSKTPDVFTEVSHMNCLTSFSNDALPVKDDDM---ANVHILC 545

Query: 398  QTKKEGTHEMSVNHKEXXXXXXXXXXXXTEMQAKWENVSSFRQRADXXXXXXXXXXXXXX 219
             T KE  + + V+                +   K    S  +QRAD              
Sbjct: 546  STHKEDDNAVEVDQAPRGVSLSVITEVDGDETIKTPVDSPCQQRADALESLLELCAQLLK 605

Query: 218  QDKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQKLGGE 96
            QDKL+ELA VLRPFG+E VSSRETAIWL KSLM AQK   E
Sbjct: 606  QDKLDELAGVLRPFGKEAVSSRETAIWLAKSLMSAQKFNAE 646


Top