BLASTX nr result
ID: Coptis23_contig00021601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021601
(1006 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-... 100 6e-60
gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate syntha... 100 7e-60
emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotia... 98 1e-59
gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase... 99 2e-59
gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana... 95 6e-59
>sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic; Short=1-deoxyxylulose-5-phosphate
synthase; Short=DXP synthase; Short=DXPS; AltName:
Full=CapTKT2; Flags: Precursor
gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum
annuum]
Length = 719
Score = 100 bits (250), Expect(3) = 6e-60
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = -1
Query: 148 PQDKFLWDVGHQTYPHKILTGRRDKMQTLRQTNGLAGFTKRSESEYDCF 2
PQD+ LWDVGHQ+YPHKILTGRR+KM TLRQTNGLAGFTKRSESEYDCF
Sbjct: 135 PQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDCF 183
Score = 90.5 bits (223), Expect(3) = 6e-60
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = -3
Query: 374 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNVPQDKFL 231
LKQLADELRSD IFNVSKTGGHLGSSLGVVELTVALHYVFN PQD+ L
Sbjct: 93 LKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRIL 140
Score = 88.2 bits (217), Expect(3) = 6e-60
Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Frame = -1
Query: 700 MALSTFSFPSCLSR--AGATDTHK-----TXXXXXXXLQYPFQQNIVQVRKRSGEVRASL 542
MAL ++FP L+R A A+D K + LQ+ F Q + QV+KRS V+ASL
Sbjct: 1 MALCAYAFPGILNRTVAVASDASKPTPLFSEWIHGTDLQFQFHQKLTQVKKRSRTVQASL 60
Query: 541 SEKGEYHSQRPPTPLLDTINYPIHMKNLS 455
SE GEY++QRPPTP++DTINYPIHMKNLS
Sbjct: 61 SESGEYYTQRPPTPIVDTINYPIHMKNLS 89
>gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
somnifera] gi|386082787|gb|AFI98880.1| chloroplast
1-deoxy-D-xylulose-5-phosphate synthase [Withania
somnifera]
Length = 717
Score = 100 bits (250), Expect(3) = 7e-60
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = -1
Query: 148 PQDKFLWDVGHQTYPHKILTGRRDKMQTLRQTNGLAGFTKRSESEYDCF 2
PQD+ LWDVGHQ+YPHKILTGRR+KM TLRQTNGLAGFTKRSESEYDCF
Sbjct: 133 PQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDCF 181
Score = 89.4 bits (220), Expect(3) = 7e-60
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = -1
Query: 700 MALSTFSFPSCLSRAGATDTHK-----TXXXXXXXLQYPFQQNIVQVRKRSGEVRASLSE 536
MAL ++FP L R +D+ K + LQ+ FQ QV+KRS V+ASLSE
Sbjct: 1 MALCAYAFPGFLIRTAVSDSPKQSSLFSEWFHGTDLQFQFQHKFTQVKKRSRVVQASLSE 60
Query: 535 KGEYHSQRPPTPLLDTINYPIHMKNLS 455
GEY++QRPPTP+LDTINYPIHMKNLS
Sbjct: 61 TGEYYTQRPPTPILDTINYPIHMKNLS 87
Score = 89.0 bits (219), Expect(3) = 7e-60
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 374 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNVPQDKFL 231
LKQLA+ELRSD IFNVSKTGGHLGSSLGVVELTVALHYVFN PQD+ L
Sbjct: 91 LKQLAEELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRIL 138
>emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum]
Length = 717
Score = 97.8 bits (242), Expect(3) = 1e-59
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -1
Query: 148 PQDKFLWDVGHQTYPHKILTGRRDKMQTLRQTNGLAGFTKRSESEYDCF 2
PQD+ LWDVGHQ+YPHKILTGRR KM TLRQT+GLAGFTKRSESEYDCF
Sbjct: 133 PQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSESEYDCF 181
Score = 91.7 bits (226), Expect(3) = 1e-59
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = -1
Query: 700 MALSTFSFPSCLSRAGATDTHK-----TXXXXXXXLQYPFQQNIVQVRKRSGEVRASLSE 536
MAL ++ P L+R A+D K + LQY FQ + +V+KRS V+ASLSE
Sbjct: 1 MALCNYAVPGILNRTVASDYSKQSPLFSELFHGTDLQYQFQHKLTRVKKRSRGVQASLSE 60
Query: 535 KGEYHSQRPPTPLLDTINYPIHMKNLS 455
KGEY++QRPPTPLLDTINYPIHMKNLS
Sbjct: 61 KGEYYAQRPPTPLLDTINYPIHMKNLS 87
Score = 89.0 bits (219), Expect(3) = 1e-59
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 374 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNVPQDKFL 231
LKQLA+ELRSD IFNVSKTGGHLGSSLGVVELTVALHYVFN PQD+ L
Sbjct: 91 LKQLAEELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNTPQDRIL 138
>gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua]
Length = 713
Score = 99.4 bits (246), Expect(3) = 2e-59
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = -1
Query: 148 PQDKFLWDVGHQTYPHKILTGRRDKMQTLRQTNGLAGFTKRSESEYDCF 2
PQDK LWDVGHQ+YPHKILTGRRD+M T+RQTNGLAGFTKRSESE+DCF
Sbjct: 129 PQDKILWDVGHQSYPHKILTGRRDQMHTIRQTNGLAGFTKRSESEHDCF 177
Score = 93.2 bits (230), Expect(3) = 2e-59
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = -3
Query: 374 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNVPQDKFL 231
LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFN PQDK L
Sbjct: 87 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNTPQDKIL 134
Score = 85.5 bits (210), Expect(3) = 2e-59
Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = -1
Query: 700 MALSTFSFPSCLSRAGATDT-----HKTXXXXXXXLQYPFQQNIVQVRKRSGEVRASLSE 536
MALS F+FP+ ++ T H Q PF Q + KRS +R++LSE
Sbjct: 1 MALSAFAFPTQINHRSVTSNQPLIQHCLFGTDLNSSQKPFNQIV----KRSNGIRSTLSE 56
Query: 535 KGEYHSQRPPTPLLDTINYPIHMKNLS 455
+GEYHSQRPPTPLLDTINYPIHMKNLS
Sbjct: 57 RGEYHSQRPPTPLLDTINYPIHMKNLS 83
>gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum]
Length = 717
Score = 95.1 bits (235), Expect(3) = 6e-59
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = -1
Query: 148 PQDKFLWDVGHQTYPHKILTGRRDKMQTLRQTNGLAGFTKRSESEYDCF 2
PQD+ LWDVGHQ+YPHKILTGRR KM TLRQT+GLAGFTKRSES YDCF
Sbjct: 133 PQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSESVYDCF 181
Score = 92.0 bits (227), Expect(3) = 6e-59
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = -1
Query: 700 MALSTFSFPSCLSRAGATDTHK-----TXXXXXXXLQYPFQQNIVQVRKRSGEVRASLSE 536
MAL ++ P L+R A+D K + LQY FQ + QV+KRS V+ASLSE
Sbjct: 1 MALCAYAVPGILNRTVASDYSKQSPLFSELFHGTDLQYQFQHKLTQVKKRSRGVQASLSE 60
Query: 535 KGEYHSQRPPTPLLDTINYPIHMKNLS 455
+GEY++QRPPTPLLDTINYPIHMKNLS
Sbjct: 61 RGEYYAQRPPTPLLDTINYPIHMKNLS 87
Score = 89.0 bits (219), Expect(3) = 6e-59
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 374 LKQLADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNVPQDKFL 231
LKQLA+ELRSD IFNVSKTGGHLGSSLGVVELTVALHYVFN PQD+ L
Sbjct: 91 LKQLAEELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNTPQDRIL 138