BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021599
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40278.3| unnamed protein product [Vitis vinifera]              314   2e-83
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      310   2e-82
dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]                         299   6e-79
dbj|BAE93057.1| cyclin [Nicotiana tabacum]                            296   4e-78
emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]               293   2e-77

>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  314 bits (804), Expect = 2e-83
 Identities = 160/249 (64%), Positives = 188/249 (75%), Gaps = 7/249 (2%)
 Frame = -2

Query: 726 MALQNHQEQQQTDP----HFLIDSLFCXXXXXXXXXXXXEQSYNNKNGRTAPSVFLLEQD 559
           MA+  H +Q    P     FL+D+L+C                      T   + LLEQD
Sbjct: 1   MAINQHHQQTPPQPPNSSSFLLDALYCEEERWEEEEEDECLQEEAYPSSTLLPLLLLEQD 60

Query: 558 LFWEDEELVSLFTKEKSAHLVEL---DSDVCLSIARRQVIEWMLRVHAHYAFSALTALLS 388
           LFWEDEEL+SLF+KE+    +     + D  L++ARRQ +EWM++V+AHY FSA+TA+L+
Sbjct: 61  LFWEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILA 120

Query: 387 VNYLDRFLSSFKFQKDKPWMIQLAAVACLSLAAKVEETQVPLLLDLQVEESKYVFEAKTI 208
           +NYLDRFLSS  FQ+DKPWMIQLAAV CLSLAAKVEETQVPLLLDLQVE+SKYVFEAKTI
Sbjct: 121 INYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTI 180

Query: 207 QRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFLRQCERLLLLIIADSRFVR 28
           QRMELLVLSTL WKMNPVTP+SF+DHIIRRLGLK HLHWEFLR CER LL ++ADSRFVR
Sbjct: 181 QRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVR 240

Query: 27  YLPSELATS 1
           YLPS LAT+
Sbjct: 241 YLPSVLATA 249


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  310 bits (795), Expect = 2e-82
 Identities = 164/261 (62%), Positives = 193/261 (73%), Gaps = 19/261 (7%)
 Frame = -2

Query: 726 MALQNHQEQQQTDP----HFLIDSLFCXXXXXXXXXXXXE------QSYNN-KNGRTAPS 580
           MA+  H +Q    P     FL+D+L+C                   + Y N  N    PS
Sbjct: 1   MAINQHHQQTPPQPPNSSSFLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPS 60

Query: 579 -----VFLLEQDLFWEDEELVSLFTKEKSAHLVEL---DSDVCLSIARRQVIEWMLRVHA 424
                + LLEQDLFWEDEEL+SLF+KE+    +     + D  L++ARRQ +EWM++V+A
Sbjct: 61  STLLPLLLLEQDLFWEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNA 120

Query: 423 HYAFSALTALLSVNYLDRFLSSFKFQKDKPWMIQLAAVACLSLAAKVEETQVPLLLDLQV 244
           HY FSA+TA+L++NYLDRFLSS  FQ+DKPWMIQLAAV CLSLAAKVEETQVPLLLDLQV
Sbjct: 121 HYGFSAVTAILAINYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQV 180

Query: 243 EESKYVFEAKTIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFLRQCERL 64
           E+SKYVFEAKTIQRMELLVLSTL WKMNPVTP+SF+DHIIRRLGLK HLHWEFLR CER 
Sbjct: 181 EDSKYVFEAKTIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERF 240

Query: 63  LLLIIADSRFVRYLPSELATS 1
           LL ++ADSRFVRYLPS LAT+
Sbjct: 241 LLSVVADSRFVRYLPSVLATA 261


>dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]
          Length = 368

 Score =  299 bits (765), Expect = 6e-79
 Identities = 147/244 (60%), Positives = 186/244 (76%), Gaps = 2/244 (0%)
 Frame = -2

Query: 726 MALQNHQEQQQTDPHFLIDSLFCXXXXXXXXXXXXEQSYNNKNGRTAPSVFLLEQDLFWE 547
           M +Q+++  Q     FL+D+L+C                  K       + LLEQDLFWE
Sbjct: 1   MGIQHNEHNQDQTQSFLLDALYCEEERWEETIE---DEILEKEATLPLPLPLLEQDLFWE 57

Query: 546 DEELVSLFTKEKS--AHLVELDSDVCLSIARRQVIEWMLRVHAHYAFSALTALLSVNYLD 373
           DEEL+SLFTKEK   ++   + +D  L ++R++ ++W+L+V+AHY FS  TA+L++NY D
Sbjct: 58  DEELLSLFTKEKETISNFETIKTDPLLCLSRKEAVKWILKVNAHYGFSTFTAILAINYFD 117

Query: 372 RFLSSFKFQKDKPWMIQLAAVACLSLAAKVEETQVPLLLDLQVEESKYVFEAKTIQRMEL 193
           RFLSS  FQKDKPWMIQL AV CLSLAAKVEETQVPLLLD QVE++KYVFEAKTIQRMEL
Sbjct: 118 RFLSSLHFQKDKPWMIQLVAVTCLSLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMEL 177

Query: 192 LVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFLRQCERLLLLIIADSRFVRYLPSE 13
           LVLS+L W+MNPVTP+SF+DHIIRRLGLK+H+HWEFL+QCER+LLL+IAD RF+ Y+PS 
Sbjct: 178 LVLSSLKWRMNPVTPLSFVDHIIRRLGLKSHIHWEFLKQCERILLLVIADCRFLSYMPSV 237

Query: 12  LATS 1
           LAT+
Sbjct: 238 LATA 241


>dbj|BAE93057.1| cyclin [Nicotiana tabacum]
          Length = 369

 Score =  296 bits (758), Expect = 4e-78
 Identities = 154/253 (60%), Positives = 190/253 (75%), Gaps = 11/253 (4%)
 Frame = -2

Query: 726 MALQNHQEQQQTDPHFLIDSLFCXXXXXXXXXXXXEQSY-----NNKNGRTAPS----VF 574
           MA++N+ EQQ+    FL+D+L+C            +++      +     T P+    + 
Sbjct: 1   MAIENN-EQQELSQSFLLDALYCEEEEEKWGDLLDDETIITPLSSELTTTTKPNSLLPLL 59

Query: 573 LLEQDLFWEDEELVSLFTKEKSAH--LVELDSDVCLSIARRQVIEWMLRVHAHYAFSALT 400
           LLEQDLFWEDEEL+SLF+KEK  H        D  L  AR   +EW+L+V+ +Y FSALT
Sbjct: 60  LLEQDLFWEDEELLSLFSKEKETHCWFNSFQDDPLLCSARVDAVEWILKVNGYYGFSALT 119

Query: 399 ALLSVNYLDRFLSSFKFQKDKPWMIQLAAVACLSLAAKVEETQVPLLLDLQVEESKYVFE 220
           A+L++NY DRFL+S  +QKDKPWMIQLAAV CLSLAAKVEETQVPLLLD QVE++KYVFE
Sbjct: 120 AILAINYFDRFLTSLHYQKDKPWMIQLAAVTCLSLAAKVEETQVPLLLDFQVEDAKYVFE 179

Query: 219 AKTIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFLRQCERLLLLIIADS 40
           AKTIQRMELLVLS+L W+MNPVTP+SFLDHIIRRLGLKN++HWEFLR+CE LLL I+AD 
Sbjct: 180 AKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLKNNVHWEFLRRCESLLLSIMADC 239

Query: 39  RFVRYLPSELATS 1
           RFVRY+PS LAT+
Sbjct: 240 RFVRYMPSVLATA 252


>emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]
          Length = 373

 Score =  293 bits (751), Expect = 2e-77
 Identities = 153/257 (59%), Positives = 188/257 (73%), Gaps = 15/257 (5%)
 Frame = -2

Query: 726 MALQNHQEQQQTDPHFLIDSLFCXXXXXXXXXXXXEQSY---------NNKNGRTAPS-- 580
           MA++ H EQQ+    FL+D+L+C            +++                T P+  
Sbjct: 1   MAIE-HNEQQELSQSFLLDALYCEEEEEKWGDLVDDETIITPLSSEVTTTTTTTTKPNSL 59

Query: 579 --VFLLEQDLFWEDEELVSLFTKEKSAH--LVELDSDVCLSIARRQVIEWMLRVHAHYAF 412
             + LLEQDLFWEDEEL+SLF+KEK  H        D  L  AR   +EW+L+V+ +Y F
Sbjct: 60  LPLLLLEQDLFWEDEELLSLFSKEKETHCWFNSFQDDSLLCSARVDSVEWILKVNGYYGF 119

Query: 411 SALTALLSVNYLDRFLSSFKFQKDKPWMIQLAAVACLSLAAKVEETQVPLLLDLQVEESK 232
           SALTA+L++NY DRFL+S  +QKDKPWMIQLAAV CLSLAAKVEETQVPLLLD QVE++K
Sbjct: 120 SALTAVLAINYFDRFLTSLHYQKDKPWMIQLAAVTCLSLAAKVEETQVPLLLDFQVEDAK 179

Query: 231 YVFEAKTIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFLRQCERLLLLI 52
           YVFEAKTIQRMELLVLS+L W+MNPVTP+SFLDHIIRRLGL+N++HWEFLR+CE LLL I
Sbjct: 180 YVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLRNNIHWEFLRRCENLLLSI 239

Query: 51  IADSRFVRYLPSELATS 1
           +AD RFVRY+PS LAT+
Sbjct: 240 MADCRFVRYMPSVLATA 256