BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021577
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   474   e-131
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   453   e-125
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-120
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   436   e-120
ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  474 bits (1221), Expect = e-131
 Identities = 229/344 (66%), Positives = 279/344 (81%)
 Frame = -2

Query: 1337 KNVDLAVILFKEASDKGIKTSSTFNALMGVCMYNDLPDKCQSLFRDLKREITCRPTIATY 1158
            KNVDLAV LF EA++K IKT+ST+NALMG  M N   +KCQ+LFRDLKRE +C PTI TY
Sbjct: 151  KNVDLAVELFTEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCSPTIVTY 210

Query: 1157 NILLSVFGRLMLVDHMEATFRDIENSNLTPNLNTYNYIISGYVTAWMWEDMERVYRTMEE 978
            NIL+SVFGRLMLVDHMEATFR+I+   L+PN++TYN II+GYVTAWMW  ME  +RTM+E
Sbjct: 211  NILISVFGRLMLVDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDTFRTMKE 270

Query: 977  GPVKPEVSTHLLMLRGYSHSVNLEKMEKTFEIVKDHINENEVPLIRAMITAYCKSSDKDR 798
              ++P+++THLLMLRGY+HS NL+KME+T+E++K H+N+ E+PLIRAMI AYCKSS  DR
Sbjct: 271  DNIQPDINTHLLMLRGYAHSGNLQKMEETYELIKGHVNDKEIPLIRAMICAYCKSSITDR 330

Query: 797  VSKVEALLKLIPEDEYRAWLNVILIKLYAQEDLVDTMEIFIGQAFEHNTSVNTVGVMRLI 618
            V K+ AL+KLIPE+EYR WLNV+LI++YAQED V+ ME  I +AFEH TSV T+ VMR I
Sbjct: 331  VEKIGALMKLIPENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTMRVMRSI 390

Query: 617  IASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNL 438
            IA+YFRC+ V+RL +FVKRAE   W ICRSLYHCKMVMY+S  RLEEME+VL EME  N 
Sbjct: 391  IATYFRCNAVDRLANFVKRAECGGWHICRSLYHCKMVMYASQKRLEEMESVLNEMESSNF 450

Query: 437  DPTKKTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSDAFFS 306
              TKKTF I+YKAYS W QR +V ++ G MCKHG+ IPSD   S
Sbjct: 451  CCTKKTFWILYKAYSMWDQRHKVEQVKGLMCKHGYGIPSDVLLS 494


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  453 bits (1166), Expect = e-125
 Identities = 212/341 (62%), Positives = 275/341 (80%)
 Frame = -2

Query: 1337 KNVDLAVILFKEASDKGIKTSSTFNALMGVCMYNDLPDKCQSLFRDLKREITCRPTIATY 1158
            KNVDLA+ +F EA  K  K +  +NALMG  MYN   DKCQSLF D K+E    P++ TY
Sbjct: 166  KNVDLAIEIFAEACSKRRKKTCIYNALMGAYMYNGHYDKCQSLFLDFKKEANIGPSVVTY 225

Query: 1157 NILLSVFGRLMLVDHMEATFRDIENSNLTPNLNTYNYIISGYVTAWMWEDMERVYRTMEE 978
            NIL+SVFGR MLVDHMEATFR++ N N++PN++TYN +I+GYVTAWMW+DME+V++ M+E
Sbjct: 226  NILISVFGRSMLVDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWMWDDMEQVFQLMKE 285

Query: 977  GPVKPEVSTHLLMLRGYSHSVNLEKMEKTFEIVKDHINENEVPLIRAMITAYCKSSDKDR 798
            GP+ P + T+LLMLRGY+HS N+EKME+ +++V+DH+N NEVPLIR MI AYCKSS  DR
Sbjct: 286  GPIYPHLDTYLLMLRGYAHSGNIEKMEEMYKLVQDHVNVNEVPLIRTMICAYCKSSITDR 345

Query: 797  VSKVEALLKLIPEDEYRAWLNVILIKLYAQEDLVDTMEIFIGQAFEHNTSVNTVGVMRLI 618
            + K+E LL+LIPE+EYR WLNV+LIK+YAQ++L++ ME  I +AF+H T++ TVG+MR I
Sbjct: 346  IKKIEELLRLIPEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKHETTITTVGIMRTI 405

Query: 617  IASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNL 438
            IASYFRC+ V+RL  FVKRAE S WRICRSLYHCKMVMY+S  RL+EME+VL +ME FNL
Sbjct: 406  IASYFRCNAVDRLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDEMESVLNDMENFNL 465

Query: 437  DPTKKTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSDA 315
              TKKTF+I+YKAY   G++ +V ++LG M KHG+++P  A
Sbjct: 466  GRTKKTFVILYKAYLMCGKKYKVEQVLGLMYKHGYEVPEGA 506


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 442

 Score =  438 bits (1127), Expect = e-120
 Identities = 210/341 (61%), Positives = 266/341 (78%)
 Frame = -2

Query: 1334 NVDLAVILFKEASDKGIKTSSTFNALMGVCMYNDLPDKCQSLFRDLKREITCRPTIATYN 1155
            NVDLAV LFKEA+ KGIKT+ T+NALMG  M+N LPD CQSLF DLKR++TC P+IATYN
Sbjct: 101  NVDLAVKLFKEAAVKGIKTTGTYNALMGAFMFNGLPDNCQSLFCDLKRDLTCDPSIATYN 160

Query: 1154 ILLSVFGRLMLVDHMEATFRDIENSNLTPNLNTYNYIISGYVTAWMWEDMERVYRTMEEG 975
            ILLSV+GRLMLVDHMEATF +I+  NL  N+ TYN++I+GY+TAWMW+DME+V++ ++  
Sbjct: 161  ILLSVYGRLMLVDHMEATFSEIQRLNLAMNICTYNHLIAGYITAWMWDDMEKVFQMLKLS 220

Query: 974  PVKPEVSTHLLMLRGYSHSVNLEKMEKTFEIVKDHINENEVPLIRAMITAYCKSSDKDRV 795
             V+P + THLLMLRGY++S NLEKME+ +  ++DH+N  E+ LIR MI AYC+SS  DR+
Sbjct: 221  SVEPNMKTHLLMLRGYANSGNLEKMEEMYSFIRDHVNIKEISLIRCMICAYCRSSHADRL 280

Query: 794  SKVEALLKLIPEDEYRAWLNVILIKLYAQEDLVDTMEIFIGQAFEHNTSVNTVGVMRLII 615
             K+E LLK IP+ EYR WLNV+LIKLYA+ED +  ME  I +AFEH TS+ T G++R II
Sbjct: 281  KKIELLLKFIPQKEYRPWLNVLLIKLYAKEDWLAKMENAINEAFEHGTSITTKGILRRII 340

Query: 614  ASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNLD 435
            A+Y+RC+ VE+L +FV+RAE S W ICRSLYHCK+VMY S   L EM NVL+EME   L 
Sbjct: 341  ATYYRCNAVEKLENFVRRAEISGWSICRSLYHCKLVMYGSQMTLLEMHNVLEEMENVKLK 400

Query: 434  PTKKTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSDAF 312
             +KKT  IMYKAY   GQ S V++ LG M KHG+++P  AF
Sbjct: 401  CSKKTLWIMYKAYMSRGQISMVLKTLGQMFKHGYEVPLSAF 441


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Cucumis sativus] gi|449494249|ref|XP_004159492.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  436 bits (1122), Expect = e-120
 Identities = 213/338 (63%), Positives = 265/338 (78%)
 Frame = -2

Query: 1337 KNVDLAVILFKEASDKGIKTSSTFNALMGVCMYNDLPDKCQSLFRDLKREITCRPTIATY 1158
            K++DLAV LF EAS+K +K +ST+NALMGV M+N L DKC S+FRDLKR+  C P I TY
Sbjct: 169  KHIDLAVGLFNEASNKRVKATSTYNALMGVFMFNGLADKCNSVFRDLKRDAGCVPNIVTY 228

Query: 1157 NILLSVFGRLMLVDHMEATFRDIENSNLTPNLNTYNYIISGYVTAWMWEDMERVYRTMEE 978
            NIL+SVFGRLMLVDHMEAT R+I N NL+PN+NTYN +I+GY+TAWMW+ ME+ +  M+ 
Sbjct: 229  NILISVFGRLMLVDHMEATMREIHNLNLSPNVNTYNSLIAGYITAWMWKRMEQAFMKMKA 288

Query: 977  GPVKPEVSTHLLMLRGYSHSVNLEKMEKTFEIVKDHINENEVPLIRAMITAYCKSSDKDR 798
              + P   T LLMLRGY+HS NLEKME+    +KDH+N+N  PLIRAMI AY +SS  D+
Sbjct: 289  SSITPNTETFLLMLRGYAHSDNLEKMEEMHHFLKDHVNKNNFPLIRAMIYAYSRSSITDK 348

Query: 797  VSKVEALLKLIPEDEYRAWLNVILIKLYAQEDLVDTMEIFIGQAFEHNTSVNTVGVMRLI 618
            V K++ALLKLIPE+EYR WLNV LI++YAQ D ++ ME  I +AFEH TSV TV VMR I
Sbjct: 349  VHKIDALLKLIPEEEYRPWLNVKLIRVYAQADCLERMENSINEAFEHGTSVYTVHVMRSI 408

Query: 617  IASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNL 438
            IASYFRC+ V++L +F+ RAESS WRICRSLYHCKMVM++S NRLEEME VL EM+ FNL
Sbjct: 409  IASYFRCNAVDKLINFISRAESSGWRICRSLYHCKMVMFASQNRLEEMECVLDEMKNFNL 468

Query: 437  DPTKKTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIP 324
            D +KKTF I+YKAYS  G R +  +++  MCK G+ +P
Sbjct: 469  DWSKKTFYILYKAYSTSGCRYKANQVVCRMCKLGYGVP 506


>ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|222867623|gb|EEF04754.1|
            predicted protein [Populus trichocarpa]
          Length = 360

 Score =  429 bits (1102), Expect = e-117
 Identities = 203/340 (59%), Positives = 265/340 (77%)
 Frame = -2

Query: 1337 KNVDLAVILFKEASDKGIKTSSTFNALMGVCMYNDLPDKCQSLFRDLKREITCRPTIATY 1158
            KNVDLAV +F EA  K IKT+S +NALM  CM N L  KC+SLFR++KR++ CRP++ TY
Sbjct: 17   KNVDLAVEIFDEAIKKCIKTTSMYNALMTACMCNGLAGKCESLFREMKRDVKCRPSVVTY 76

Query: 1157 NILLSVFGRLMLVDHMEATFRDIENSNLTPNLNTYNYIISGYVTAWMWEDMERVYRTMEE 978
            NIL+SVFGRLMLVD MEA F+++E+S ++PNL TYN +ISGYVT WMW+ ME+ ++ M  
Sbjct: 77   NILVSVFGRLMLVDKMEAIFKEMEDSRISPNLTTYNNLISGYVTVWMWDSMEKTFQMMIA 136

Query: 977  GPVKPEVSTHLLMLRGYSHSVNLEKMEKTFEIVKDHINENEVPLIRAMITAYCKSSDKDR 798
            GPVKP+++THLLMLRGY+HS +LE+ME  +E++KDH+N   + LIRAMI AYCKSS  +R
Sbjct: 137  GPVKPDLNTHLLMLRGYAHSGHLEQMELVYELIKDHVNARRLTLIRAMICAYCKSSIPER 196

Query: 797  VSKVEALLKLIPEDEYRAWLNVILIKLYAQEDLVDTMEIFIGQAFEHNTSVNTVGVMRLI 618
            V K+EAL++LIPE EYR WLNV+LIKLYA+ED ++ ME  I +AF H  +++TV +M+ I
Sbjct: 197  VQKIEALMRLIPEKEYRPWLNVLLIKLYAEEDRLEGMENSINEAFNHRITISTVSIMQAI 256

Query: 617  IASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNL 438
            I SYFRC+ V++LT F+KRA  + WRI R L+HCKMVMY +  RL+EME+VL EME  NL
Sbjct: 257  ITSYFRCNAVDKLTDFIKRATYARWRIIRPLFHCKMVMYGTQKRLDEMESVLIEMENCNL 316

Query: 437  DPTKKTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSD 318
              TKKTF I+YKAY + GQ  +V ++ G MCKHG+  P D
Sbjct: 317  PRTKKTFWILYKAYLNCGQWYKVEQVAGLMCKHGYGNPFD 356