BLASTX nr result

ID: Coptis23_contig00021538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021538
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269445.2| PREDICTED: homeobox protein LUMINIDEPENDENS-...   130   1e-28
emb|CBI32244.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002321023.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...   130   2e-28
ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...   120   2e-25

>ref|XP_002269445.2| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Vitis vinifera]
          Length = 1075

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/113 (57%), Positives = 83/113 (73%)
 Frame = +2

Query: 185 QTSQGEYSSSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNM 364
           +   G    SDP M  I+  PLNS+ P +  E PSCS++ E + G DD E+ F+ENIF +
Sbjct: 142 ELQDGVLIPSDP-MIPIDQAPLNSIGPSSAEEVPSCSTQAEALHGLDDSERYFLENIFTL 200

Query: 365 MRKEVTFSGQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523
           MRKE TFSGQ +LMEWILQ+QNSSVL WF++KGG+M+L  WLS+AA EEQT+V
Sbjct: 201 MRKEETFSGQVELMEWILQMQNSSVLNWFLSKGGMMILATWLSQAANEEQTSV 253


>emb|CBI32244.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/113 (57%), Positives = 83/113 (73%)
 Frame = +2

Query: 185 QTSQGEYSSSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNM 364
           +   G    SDP M  I+  PLNS+ P +  E PSCS++ E + G DD E+ F+ENIF +
Sbjct: 142 ELQDGVLIPSDP-MIPIDQAPLNSIGPSSAEEVPSCSTQAEALHGLDDSERYFLENIFTL 200

Query: 365 MRKEVTFSGQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523
           MRKE TFSGQ +LMEWILQ+QNSSVL WF++KGG+M+L  WLS+AA EEQT+V
Sbjct: 201 MRKEETFSGQVELMEWILQMQNSSVLNWFLSKGGMMILATWLSQAANEEQTSV 253


>ref|XP_002321023.1| predicted protein [Populus trichocarpa] gi|222861796|gb|EEE99338.1|
           predicted protein [Populus trichocarpa]
          Length = 1136

 Score =  130 bits (327), Expect = 1e-28
 Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 6/161 (3%)
 Frame = +2

Query: 59  VQTPLSTM--IQIPLNTTDQTPLNI----MDQTPLNTMDPNTITPDAGQTSQGEYSSSDP 220
           +  PL+++  I  PLN+    P ++     +  PL ++ PN +  +          S   
Sbjct: 186 ISAPLNSVSSISAPLNSVSPNPFHLESVSSNPVPLISVSPNPVPLNHASLYPVPLDSV-- 243

Query: 221 SMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFSGQAK 400
                NP PLNS  P    E PSCS++ + +PG D+ +K F+ENIF ++RKE TF+GQ K
Sbjct: 244 ---AHNPVPLNSAGPSRVDEAPSCSTQDDMLPGLDELDKHFVENIFGLLRKEETFTGQVK 300

Query: 401 LMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523
           LMEWILQI   SVL WF+  GG+M+LV WLS+AA EEQT+V
Sbjct: 301 LMEWILQIHTLSVLNWFLFNGGVMILVTWLSQAAAEEQTSV 341


>ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus]
          Length = 438

 Score =  130 bits (326), Expect = 2e-28
 Identities = 67/145 (46%), Positives = 88/145 (60%)
 Frame = +2

Query: 89  IPLNTTDQTPLNIMDQTPLNTMDPNTITPDAGQTSQGEYSSSDPSMHVINPTPLNSVDPR 268
           +PLN+    PLN     PLN+  P  +  D                    P PLN+++P 
Sbjct: 161 VPLNSDAVVPLNSDAPMPLNSEAPVPLYFDT-------------------PVPLNTIEPS 201

Query: 269 TDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFSGQAKLMEWILQIQNSSVLYW 448
               GPSCS++   + G D  +K F++ IF+MM+KE TFSGQ KLMEWILQIQNSSVL W
Sbjct: 202 NVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETFSGQVKLMEWILQIQNSSVLCW 261

Query: 449 FVTKGGLMMLVAWLSEAALEEQTTV 523
           F+TKGG ++L  WLS+AA EEQT++
Sbjct: 262 FLTKGGAIILATWLSQAAAEEQTSL 286


>ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Glycine max]
          Length = 1024

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = +2

Query: 209 SSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFS 388
           +SDP M  INPTPLNS   +++ E  SCS+++  +P  DD +K+F++NIF++++KE TFS
Sbjct: 149 NSDP-MRPINPTPLNSAG-QSNTEEASCSTQEVALPDLDDSDKQFVDNIFSLIQKEETFS 206

Query: 389 GQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523
           GQ KLMEWIL IQN SVL WF+++GG M L  WLS+AA EEQT+V
Sbjct: 207 GQEKLMEWILTIQNFSVLLWFLSRGGGMNLATWLSKAAAEEQTSV 251


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