BLASTX nr result
ID: Coptis23_contig00021538
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021538 (523 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269445.2| PREDICTED: homeobox protein LUMINIDEPENDENS-... 130 1e-28 emb|CBI32244.3| unnamed protein product [Vitis vinifera] 130 1e-28 ref|XP_002321023.1| predicted protein [Populus trichocarpa] gi|2... 130 1e-28 ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-... 130 2e-28 ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-... 120 2e-25 >ref|XP_002269445.2| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Vitis vinifera] Length = 1075 Score = 130 bits (327), Expect = 1e-28 Identities = 65/113 (57%), Positives = 83/113 (73%) Frame = +2 Query: 185 QTSQGEYSSSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNM 364 + G SDP M I+ PLNS+ P + E PSCS++ E + G DD E+ F+ENIF + Sbjct: 142 ELQDGVLIPSDP-MIPIDQAPLNSIGPSSAEEVPSCSTQAEALHGLDDSERYFLENIFTL 200 Query: 365 MRKEVTFSGQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523 MRKE TFSGQ +LMEWILQ+QNSSVL WF++KGG+M+L WLS+AA EEQT+V Sbjct: 201 MRKEETFSGQVELMEWILQMQNSSVLNWFLSKGGMMILATWLSQAANEEQTSV 253 >emb|CBI32244.3| unnamed protein product [Vitis vinifera] Length = 1084 Score = 130 bits (327), Expect = 1e-28 Identities = 65/113 (57%), Positives = 83/113 (73%) Frame = +2 Query: 185 QTSQGEYSSSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNM 364 + G SDP M I+ PLNS+ P + E PSCS++ E + G DD E+ F+ENIF + Sbjct: 142 ELQDGVLIPSDP-MIPIDQAPLNSIGPSSAEEVPSCSTQAEALHGLDDSERYFLENIFTL 200 Query: 365 MRKEVTFSGQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523 MRKE TFSGQ +LMEWILQ+QNSSVL WF++KGG+M+L WLS+AA EEQT+V Sbjct: 201 MRKEETFSGQVELMEWILQMQNSSVLNWFLSKGGMMILATWLSQAANEEQTSV 253 >ref|XP_002321023.1| predicted protein [Populus trichocarpa] gi|222861796|gb|EEE99338.1| predicted protein [Populus trichocarpa] Length = 1136 Score = 130 bits (327), Expect = 1e-28 Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 6/161 (3%) Frame = +2 Query: 59 VQTPLSTM--IQIPLNTTDQTPLNI----MDQTPLNTMDPNTITPDAGQTSQGEYSSSDP 220 + PL+++ I PLN+ P ++ + PL ++ PN + + S Sbjct: 186 ISAPLNSVSSISAPLNSVSPNPFHLESVSSNPVPLISVSPNPVPLNHASLYPVPLDSV-- 243 Query: 221 SMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFSGQAK 400 NP PLNS P E PSCS++ + +PG D+ +K F+ENIF ++RKE TF+GQ K Sbjct: 244 ---AHNPVPLNSAGPSRVDEAPSCSTQDDMLPGLDELDKHFVENIFGLLRKEETFTGQVK 300 Query: 401 LMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523 LMEWILQI SVL WF+ GG+M+LV WLS+AA EEQT+V Sbjct: 301 LMEWILQIHTLSVLNWFLFNGGVMILVTWLSQAAAEEQTSV 341 >ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus] Length = 438 Score = 130 bits (326), Expect = 2e-28 Identities = 67/145 (46%), Positives = 88/145 (60%) Frame = +2 Query: 89 IPLNTTDQTPLNIMDQTPLNTMDPNTITPDAGQTSQGEYSSSDPSMHVINPTPLNSVDPR 268 +PLN+ PLN PLN+ P + D P PLN+++P Sbjct: 161 VPLNSDAVVPLNSDAPMPLNSEAPVPLYFDT-------------------PVPLNTIEPS 201 Query: 269 TDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFSGQAKLMEWILQIQNSSVLYW 448 GPSCS++ + G D +K F++ IF+MM+KE TFSGQ KLMEWILQIQNSSVL W Sbjct: 202 NVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETFSGQVKLMEWILQIQNSSVLCW 261 Query: 449 FVTKGGLMMLVAWLSEAALEEQTTV 523 F+TKGG ++L WLS+AA EEQT++ Sbjct: 262 FLTKGGAIILATWLSQAAAEEQTSL 286 >ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Glycine max] Length = 1024 Score = 120 bits (300), Expect = 2e-25 Identities = 60/105 (57%), Positives = 81/105 (77%) Frame = +2 Query: 209 SSDPSMHVINPTPLNSVDPRTDGEGPSCSSKQETIPGADDFEKKFIENIFNMMRKEVTFS 388 +SDP M INPTPLNS +++ E SCS+++ +P DD +K+F++NIF++++KE TFS Sbjct: 149 NSDP-MRPINPTPLNSAG-QSNTEEASCSTQEVALPDLDDSDKQFVDNIFSLIQKEETFS 206 Query: 389 GQAKLMEWILQIQNSSVLYWFVTKGGLMMLVAWLSEAALEEQTTV 523 GQ KLMEWIL IQN SVL WF+++GG M L WLS+AA EEQT+V Sbjct: 207 GQEKLMEWILTIQNFSVLLWFLSRGGGMNLATWLSKAAAEEQTSV 251