BLASTX nr result

ID: Coptis23_contig00021525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021525
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis...   439   e-121
ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   439   e-121
emb|CBI33503.3| unnamed protein product [Vitis vinifera]              439   e-121
ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119
emb|CBI29095.3| unnamed protein product [Vitis vinifera]              429   e-118

>ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 958

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/256 (82%), Positives = 225/256 (87%)
 Frame = -2

Query: 775  RNSEEALVKAREKYGYGVEIYQDPDVLDTWFSSALWPFSTLGWPDVSADDYRHFYPTAVL 596
            RN+ EAL KA+EKYG  VEIYQ+PDVLDTWFSSALWPFSTLGWPDVS  D++ FYPT VL
Sbjct: 484  RNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVL 543

Query: 595  ETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKE 416
            ETGHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKE
Sbjct: 544  ETGHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKE 603

Query: 415  FGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENII 236
            FGTDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+
Sbjct: 604  FGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETIL 663

Query: 235  AYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYI 56
            A KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYI
Sbjct: 664  ACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYI 723

Query: 55   ETSKARLYQSEGNSMA 8
            E SKARLY S G+S+A
Sbjct: 724  EASKARLYHSGGHSVA 739


>ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 959

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/256 (82%), Positives = 225/256 (87%)
 Frame = -2

Query: 775  RNSEEALVKAREKYGYGVEIYQDPDVLDTWFSSALWPFSTLGWPDVSADDYRHFYPTAVL 596
            RN+ EAL KA+EKYG  VEIYQ+PDVLDTWFSSALWPFSTLGWPDVS  D++ FYPT VL
Sbjct: 485  RNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVL 544

Query: 595  ETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKE 416
            ETGHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKE
Sbjct: 545  ETGHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKE 604

Query: 415  FGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENII 236
            FGTDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+
Sbjct: 605  FGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETIL 664

Query: 235  AYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYI 56
            A KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYI
Sbjct: 665  ACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYI 724

Query: 55   ETSKARLYQSEGNSMA 8
            E SKARLY S G+S+A
Sbjct: 725  EASKARLYHSGGHSVA 740


>emb|CBI33503.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/256 (82%), Positives = 225/256 (87%)
 Frame = -2

Query: 775 RNSEEALVKAREKYGYGVEIYQDPDVLDTWFSSALWPFSTLGWPDVSADDYRHFYPTAVL 596
           RN+ EAL KA+EKYG  VEIYQ+PDVLDTWFSSALWPFSTLGWPDVS  D++ FYPT VL
Sbjct: 179 RNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVL 238

Query: 595 ETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKE 416
           ETGHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKE
Sbjct: 239 ETGHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKE 298

Query: 415 FGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENII 236
           FGTDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+
Sbjct: 299 FGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETIL 358

Query: 235 AYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYI 56
           A KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYI
Sbjct: 359 ACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYI 418

Query: 55  ETSKARLYQSEGNSMA 8
           E SKARLY S G+S+A
Sbjct: 419 EASKARLYHSGGHSVA 434


>ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|222843431|gb|EEE80978.1|
            predicted protein [Populus trichocarpa]
          Length = 951

 Score =  433 bits (1114), Expect = e-119
 Identities = 208/257 (80%), Positives = 226/257 (87%)
 Frame = -2

Query: 775  RNSEEALVKAREKYGYGVEIYQDPDVLDTWFSSALWPFSTLGWPDVSADDYRHFYPTAVL 596
            RN++EAL KAREKYG  VEIYQDPDVLDTWFSSALWPFSTLGWPDVSA+D++ FYPT +L
Sbjct: 463  RNADEALEKAREKYGKNVEIYQDPDVLDTWFSSALWPFSTLGWPDVSAEDFKKFYPTTML 522

Query: 595  ETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKE 416
            ETGHDILFFWVARMVMMGIEFTGTVPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKE
Sbjct: 523  ETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPLDTIKE 582

Query: 415  FGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENII 236
            FGTDALRFT++LGTAGQDLNLS ERL++NKAFTNKLWNAGKF+LQN+PSQ+DVSAWE I 
Sbjct: 583  FGTDALRFTISLGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLQNMPSQTDVSAWEAIR 642

Query: 235  AYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYI 56
              KFD           ECWVVS+LH LID VT SY+K+FFGDVGREIYDFFW DFADWYI
Sbjct: 643  NCKFDKEESVLRLPLPECWVVSELHVLIDMVTASYDKFFFGDVGREIYDFFWSDFADWYI 702

Query: 55   ETSKARLYQSEGNSMAS 5
            E SKARLYQS  NS  S
Sbjct: 703  EASKARLYQSGANSACS 719


>emb|CBI29095.3| unnamed protein product [Vitis vinifera]
          Length = 963

 Score =  429 bits (1102), Expect = e-118
 Identities = 209/260 (80%), Positives = 223/260 (85%), Gaps = 4/260 (1%)
 Frame = -2

Query: 775  RNSEEALVKAREKYGYGVEIYQDPDVLDTWFSSALWPFSTLGWPDVSADDYRHFYPTAVL 596
            RN+ EAL KA+EKYG  VEIYQ+PDVLDTWFSSALWPFSTLGWPDVS  D++ FYPT VL
Sbjct: 485  RNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVSTQDFKKFYPTTVL 544

Query: 595  ETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQG----RKMSKTLGNVIDPVD 428
            ETGHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQ      KMSKTLGNVIDP+D
Sbjct: 545  ETGHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQASTMQEKMSKTLGNVIDPID 604

Query: 427  TIKEFGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAW 248
            TIKEFGTDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAW
Sbjct: 605  TIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAW 664

Query: 247  ENIIAYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFA 68
            E I+A KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFA
Sbjct: 665  ETILACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFA 724

Query: 67   DWYIETSKARLYQSEGNSMA 8
            DWYIE SKARLY S G+S+A
Sbjct: 725  DWYIEASKARLYHSGGHSVA 744


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