BLASTX nr result

ID: Coptis23_contig00021522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021522
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311394.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003594776.1| Bromodomain and WD repeat-containing protein...    73   2e-11
gb|ABN06020.1| Cytochrome cd1-nitrite reductase-like, C-terminal...    73   2e-11
ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819...    71   8e-11
ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818...    69   4e-10

>ref|XP_002311394.1| predicted protein [Populus trichocarpa] gi|222851214|gb|EEE88761.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = -1

Query: 280 LRSARTKRVNYGDSHITPRD-KRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQF 104
           LRS R ++ +      +P D KRKL    K  SWLMLS H+ G RYIPQ+GD + Y+R  
Sbjct: 5   LRSTRNRKASCHFHDTSPVDGKRKLHQSAKRASWLMLSMHEEGSRYIPQQGDELAYLR-- 62

Query: 103 SI*QGHQQFGECHSSSDI--WGPLWEKLRAVESCKV 2
              QGHQ++ +C  S +   W  +   +RAVE CKV
Sbjct: 63  ---QGHQEYIDCMKSKEAGPWKTIKGNIRAVEFCKV 95


>ref|XP_003594776.1| Bromodomain and WD repeat-containing protein [Medicago truncatula]
            gi|355483824|gb|AES65027.1| Bromodomain and WD
            repeat-containing protein [Medicago truncatula]
          Length = 1844

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280  LRSARTKRVNYGDSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQFS 101
            LRS R +R  Y     +P ++RK        SWL+LS H+ G RYIPQ+GD VVY+R   
Sbjct: 1512 LRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDEVVYLR--- 1568

Query: 100  I*QGHQQFGEC--HSSSDIWGPLWEKLRAVESCKV 2
              QGHQ++ E      S  W  L E LRAVE C+V
Sbjct: 1569 --QGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRV 1601


>gb|ABN06020.1| Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 [Medicago
            truncatula]
          Length = 1826

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280  LRSARTKRVNYGDSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQFS 101
            LRS R +R  Y     +P ++RK        SWL+LS H+ G RYIPQ+GD VVY+R   
Sbjct: 1494 LRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDEVVYLR--- 1550

Query: 100  I*QGHQQFGEC--HSSSDIWGPLWEKLRAVESCKV 2
              QGHQ++ E      S  W  L E LRAVE C+V
Sbjct: 1551 --QGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRV 1583


>ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819598 [Glycine max]
          Length = 1777

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280  LRSARTKRVNYGDSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQFS 101
            LRS R +R +Y     +P +KRK        SWL+LS H+ G RYIPQ+GD VVY+R   
Sbjct: 1445 LRSTRNRRSSYNIRETSPVNKRKSLQSATRGSWLLLSTHEEGCRYIPQQGDEVVYLR--- 1501

Query: 100  I*QGHQQF-GECHS-SSDIWGPLWEKLRAVESCKV 2
              QGHQ++   C    S  W  L   +RAVE C+V
Sbjct: 1502 --QGHQEYINYCRKRESGPWVSLKGHIRAVEYCRV 1534


>ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818665 [Glycine max]
          Length = 1773

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280  LRSARTKRVNYGDSHITPRDKRKLPHLMKNVSWLMLSEHDVGLRYIPQKGDNVVYIRQFS 101
            LRS R +R +Y     +P +KRK        SWL+LS H+ G RYIPQ+GD V Y+R   
Sbjct: 1441 LRSNRNRRSSYNICETSPVNKRKSLQSATRGSWLLLSTHEEGCRYIPQQGDEVAYLR--- 1497

Query: 100  I*QGHQQFGE-CHS-SSDIWGPLWEKLRAVESCKV 2
              QGHQ++ + C    S  W  L   +RAVE C+V
Sbjct: 1498 --QGHQEYIDYCRKRESGPWVSLKGHIRAVEYCRV 1530


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