BLASTX nr result

ID: Coptis23_contig00021500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021500
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI70327.1| auxin binding protein [Nicotiana tabacum]              286   9e-75
ref|XP_002273447.1| PREDICTED: auxin-binding protein T85 [Vitis ...   286   1e-74
sp|P33490.1|ABP1_TOBAC RecName: Full=Auxin-binding protein T85; ...   286   1e-74
sp|P33491.1|ABP2_TOBAC RecName: Full=Auxin-binding protein T92; ...   283   6e-74
dbj|BAC66181.1| putative auxin binding protein 1 beta1 [Matricar...   283   6e-74

>gb|AEI70327.1| auxin binding protein [Nicotiana tabacum]
          Length = 188

 Score =  286 bits (732), Expect = 9e-75
 Identities = 127/171 (74%), Positives = 148/171 (86%)
 Frame = -2

Query: 751 AESSICATNGIPIVRNISELPQSDYGREGLSHMTVVGSLLHGMKEVEVWLQTFAPGSQTP 572
           AE+S C+ NG+P+VRNISELPQ +YGR GLSH T+ GS+LHGMKE+EVWLQTFAPGS+TP
Sbjct: 18  AEASQCSVNGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGSRTP 77

Query: 571 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTFHIPVNDVHQVWNSNDI 392
           IHRHSCEE+F+VLKG G L+L  SSH   PG PQEF IF NSTFHIPVNDVHQVWN+ + 
Sbjct: 78  IHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEH 137

Query: 391 EDLQVLVVISRPPVKIFMYKDWSMPHTAAKMKYPFFWDEECFHSPQLKDEL 239
           EDLQVLVVISRPPVK+FMY DWSMPHTAAK+K+P++WDEEC+ +   KDEL
Sbjct: 138 EDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 188


>ref|XP_002273447.1| PREDICTED: auxin-binding protein T85 [Vitis vinifera]
          Length = 188

 Score =  286 bits (731), Expect = 1e-74
 Identities = 128/171 (74%), Positives = 154/171 (90%)
 Frame = -2

Query: 751 AESSICATNGIPIVRNISELPQSDYGREGLSHMTVVGSLLHGMKEVEVWLQTFAPGSQTP 572
           AE+S C+  G+P+VR I+ELPQ +YGREGLSH+TV GSL+HGMKEVEVWLQTF+PGS TP
Sbjct: 19  AEASQCSAIGLPLVRKINELPQDNYGREGLSHITVAGSLMHGMKEVEVWLQTFSPGSHTP 78

Query: 571 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTFHIPVNDVHQVWNSNDI 392
           IHRHSCEEVF+VLKGSGTL+LASSSH   PGKPQE+PI SNSTFHIPVNDVHQVWN+N+ 
Sbjct: 79  IHRHSCEEVFVVLKGSGTLYLASSSHEKHPGKPQEYPIVSNSTFHIPVNDVHQVWNTNEN 138

Query: 391 EDLQVLVVISRPPVKIFMYKDWSMPHTAAKMKYPFFWDEECFHSPQLKDEL 239
           EDLQ+LV+ISRPPVK+F+Y+DW MPHTA+K+K+P++WDE+C  +P  KDEL
Sbjct: 139 EDLQMLVIISRPPVKVFIYEDWHMPHTASKLKFPYYWDEQCLQTPP-KDEL 188


>sp|P33490.1|ABP1_TOBAC RecName: Full=Auxin-binding protein T85; Short=ABP; Flags:
           Precursor gi|20034|emb|CAA50259.1| auxin-binding protein
           [Nicotiana tabacum]
          Length = 187

 Score =  286 bits (731), Expect = 1e-74
 Identities = 127/171 (74%), Positives = 148/171 (86%)
 Frame = -2

Query: 751 AESSICATNGIPIVRNISELPQSDYGREGLSHMTVVGSLLHGMKEVEVWLQTFAPGSQTP 572
           AE+S C+ NG+P+VRNISELPQ +YGR GLSH T+ GS+LHGMKE+EVWLQTFAPGS+TP
Sbjct: 17  AEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGSRTP 76

Query: 571 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTFHIPVNDVHQVWNSNDI 392
           IHRHSCEE+F+VLKG G L+L  SSH   PG PQEF IF NSTFHIPVNDVHQVWN+ + 
Sbjct: 77  IHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEH 136

Query: 391 EDLQVLVVISRPPVKIFMYKDWSMPHTAAKMKYPFFWDEECFHSPQLKDEL 239
           EDLQVLVVISRPPVK+FMY DWSMPHTAAK+K+P++WDEEC+ +   KDEL
Sbjct: 137 EDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187


>sp|P33491.1|ABP2_TOBAC RecName: Full=Auxin-binding protein T92; Short=ABP; Flags:
           Precursor gi|21947|emb|CAA50260.1| auxin-binding protein
           [Nicotiana tabacum]
          Length = 187

 Score =  283 bits (725), Expect = 6e-74
 Identities = 127/171 (74%), Positives = 147/171 (85%)
 Frame = -2

Query: 751 AESSICATNGIPIVRNISELPQSDYGREGLSHMTVVGSLLHGMKEVEVWLQTFAPGSQTP 572
           AE+S C+ NG+P+VRNISELPQ +YGR GLSH T+ GS+LHGMKE+EVWLQTFAPG +TP
Sbjct: 17  AEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGFRTP 76

Query: 571 IHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTFHIPVNDVHQVWNSNDI 392
           IHRHSCEE+FIVLKG GTL+L  SSH   PG PQEF IF NSTFHIPVNDVHQVWN+ + 
Sbjct: 77  IHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEQ 136

Query: 391 EDLQVLVVISRPPVKIFMYKDWSMPHTAAKMKYPFFWDEECFHSPQLKDEL 239
           EDLQVL VISRPPVK+FMY DWSMPHTAAK+K+P++WDEEC+ +   KDEL
Sbjct: 137 EDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKDEL 187


>dbj|BAC66181.1| putative auxin binding protein 1 beta1 [Matricaria recutita]
          Length = 189

 Score =  283 bits (725), Expect = 6e-74
 Identities = 128/174 (73%), Positives = 153/174 (87%)
 Frame = -2

Query: 760 IVAAESSICATNGIPIVRNISELPQSDYGREGLSHMTVVGSLLHGMKEVEVWLQTFAPGS 581
           I A  SS C+TNGIP+VR+IS LPQ +YGR GLSHMTV GSL+HG+KEVE+WLQTFAPG+
Sbjct: 17  ITAVTSSQCSTNGIPLVRDISTLPQDNYGRPGLSHMTVAGSLMHGLKEVEIWLQTFAPGT 76

Query: 580 QTPIHRHSCEEVFIVLKGSGTLFLASSSHGPSPGKPQEFPIFSNSTFHIPVNDVHQVWNS 401
            TPIHRHSCEEVF+VLKGSGTL+L+ +SH  +PGKP+EF IFSNSTF++PVNDVHQ+WN+
Sbjct: 77  HTPIHRHSCEEVFVVLKGSGTLYLSPNSHAKTPGKPEEFQIFSNSTFYVPVNDVHQLWNT 136

Query: 400 NDIEDLQVLVVISRPPVKIFMYKDWSMPHTAAKMKYPFFWDEECFHSPQLKDEL 239
           N+ EDLQVLVVISRPPVKIFMY DW MPHTAA +K+P+FWDE C+ +  +KDEL
Sbjct: 137 NENEDLQVLVVISRPPVKIFMYNDWLMPHTAATLKFPYFWDEHCYQT-DVKDEL 189


Top