BLASTX nr result
ID: Coptis23_contig00021495
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00021495 (721 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|2... 60 4e-07 ref|XP_002318292.1| predicted protein [Populus trichocarpa] gi|2... 60 6e-07 ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2... 60 6e-07 ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|2235... 59 1e-06 ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [... 57 4e-06 >ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|222852758|gb|EEE90305.1| predicted protein [Populus trichocarpa] Length = 835 Score = 60.1 bits (144), Expect = 4e-07 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Frame = +3 Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410 FAQ+ STIELPQ ++ VL+A L G DFLPRG EIC R+P VL Sbjct: 31 FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGNEICTRRPLVL 82 Query: 411 QLLQT*RKADGTG----GEF 458 QLLQT RK DG+G GEF Sbjct: 83 QLLQTKRKGDGSGEDEWGEF 102 >ref|XP_002318292.1| predicted protein [Populus trichocarpa] gi|222858965|gb|EEE96512.1| predicted protein [Populus trichocarpa] Length = 261 Score = 59.7 bits (143), Expect = 6e-07 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 4/80 (5%) Frame = +3 Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410 FA + STIELPQ ++ + + VL+A L G DFLPRG EIC R+P VL Sbjct: 31 FAHLGSQSTIELPQVAVVGSQS---SGKFVLEA------LVGRDFLPRGNEICTRRPLVL 81 Query: 411 QLLQT*RKADGTG----GEF 458 QLLQT RK DG+G GEF Sbjct: 82 QLLQTKRKGDGSGEDEWGEF 101 >ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1| predicted protein [Populus trichocarpa] Length = 821 Score = 59.7 bits (143), Expect = 6e-07 Identities = 39/75 (52%), Positives = 44/75 (58%) Frame = +3 Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410 FAQ+ STIELPQ ++ VL+A L G DFLPRG EIC R+P VL Sbjct: 40 FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGNEICTRRPLVL 91 Query: 411 QLLQT*RKADGTGGE 455 QLLQT RK DG G E Sbjct: 92 QLLQTKRKGDGCGEE 106 >ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|223527492|gb|EEF29620.1| dynamin, putative [Ricinus communis] Length = 837 Score = 58.5 bits (140), Expect = 1e-06 Identities = 37/78 (47%), Positives = 49/78 (62%) Frame = +3 Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410 FAQ+ STIELPQ ++ +Q K+ ++ L G DFLPRG +IC R+P VL Sbjct: 38 FAQLGSQSTIELPQVAVV-------GSQSSGKSSVL-ESLVGRDFLPRGNDICTRRPLVL 89 Query: 411 QLLQT*RKADGTGGEFNQ 464 QLLQT RKADG+ E+ + Sbjct: 90 QLLQTKRKADGSEEEWGE 107 >ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera] Length = 831 Score = 57.0 bits (136), Expect = 4e-06 Identities = 36/78 (46%), Positives = 46/78 (58%) Frame = +3 Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410 FAQ+ STIELPQ ++ VL+A L G DFLPRG +IC R+P VL Sbjct: 35 FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGSDICTRRPLVL 86 Query: 411 QLLQT*RKADGTGGEFNQ 464 QLLQT R+ DG+ E+ + Sbjct: 87 QLLQTKRRPDGSEEEYGE 104