BLASTX nr result

ID: Coptis23_contig00021495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021495
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
ref|XP_002318292.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07
ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|2235...    59   1e-06
ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [...    57   4e-06

>ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|222852758|gb|EEE90305.1|
           predicted protein [Populus trichocarpa]
          Length = 835

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = +3

Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410
           FAQ+   STIELPQ  ++           VL+A      L G DFLPRG EIC R+P VL
Sbjct: 31  FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGNEICTRRPLVL 82

Query: 411 QLLQT*RKADGTG----GEF 458
           QLLQT RK DG+G    GEF
Sbjct: 83  QLLQTKRKGDGSGEDEWGEF 102


>ref|XP_002318292.1| predicted protein [Populus trichocarpa] gi|222858965|gb|EEE96512.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
 Frame = +3

Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410
           FA +   STIELPQ  ++       + + VL+A      L G DFLPRG EIC R+P VL
Sbjct: 31  FAHLGSQSTIELPQVAVVGSQS---SGKFVLEA------LVGRDFLPRGNEICTRRPLVL 81

Query: 411 QLLQT*RKADGTG----GEF 458
           QLLQT RK DG+G    GEF
Sbjct: 82  QLLQTKRKGDGSGEDEWGEF 101


>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 39/75 (52%), Positives = 44/75 (58%)
 Frame = +3

Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410
           FAQ+   STIELPQ  ++           VL+A      L G DFLPRG EIC R+P VL
Sbjct: 40  FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGNEICTRRPLVL 91

Query: 411 QLLQT*RKADGTGGE 455
           QLLQT RK DG G E
Sbjct: 92  QLLQTKRKGDGCGEE 106


>ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|223527492|gb|EEF29620.1|
           dynamin, putative [Ricinus communis]
          Length = 837

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = +3

Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410
           FAQ+   STIELPQ  ++        +Q   K+ ++   L G DFLPRG +IC R+P VL
Sbjct: 38  FAQLGSQSTIELPQVAVV-------GSQSSGKSSVL-ESLVGRDFLPRGNDICTRRPLVL 89

Query: 411 QLLQT*RKADGTGGEFNQ 464
           QLLQT RKADG+  E+ +
Sbjct: 90  QLLQTKRKADGSEEEWGE 107


>ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera]
          Length = 831

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 36/78 (46%), Positives = 46/78 (58%)
 Frame = +3

Query: 231 FAQIMGYSTIELPQRLLLLEVKL*WANQVVLKA*LMFNHLDGSDFLPRGLEICMRKPFVL 410
           FAQ+   STIELPQ  ++           VL+A      L G DFLPRG +IC R+P VL
Sbjct: 35  FAQLGSQSTIELPQVAVVGSQSS--GKSSVLEA------LVGRDFLPRGSDICTRRPLVL 86

Query: 411 QLLQT*RKADGTGGEFNQ 464
           QLLQT R+ DG+  E+ +
Sbjct: 87  QLLQTKRRPDGSEEEYGE 104


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