BLASTX nr result

ID: Coptis23_contig00021493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021493
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   217   2e-54
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   209   7e-52
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   198   1e-48
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   194   2e-47
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   192   5e-47

>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  217 bits (553), Expect = 2e-54
 Identities = 111/253 (43%), Positives = 151/253 (59%)
 Frame = -1

Query: 761 HSMVYHEWVFRFSQXXXXXXXXXXXWSDYWTLVFCDRVLCFWWIAKPLLTTSHLVSVYSS 582
           +   + E++F  S              DYW ++FC+R+LC WWI KP L   HL  V++S
Sbjct: 91  YPFAFQEYLFPGSLFGVWVTVLLVSICDYWFVIFCNRLLCLWWIIKPFLWIPHLQVVFTS 150

Query: 581 LQVMDVCKESSSILLDXXXXXXXXXXXVMQVSTRSRKCGLEDPXXXXXXXXXXXCHRDLN 402
            +++    ES    LD               S RS    +E+P            H  + 
Sbjct: 151 QELLPCLGESFLAFLDFTFGILINIIKSKWASHRSSCDSIEEPLLPCKVDAKG--HCGIL 208

Query: 401 INALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNP 222
             A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L  CWE ++  N 
Sbjct: 209 GLANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQRNNN 268

Query: 221 SHPSLLKAICYAYGWPYLCLGLLKVFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILALS 42
           S+PSLLKA+C AYGWPY  +GLLKV NDC  FVGP+LLNKLI FLQ+GS + DGYI A+S
Sbjct: 269 SNPSLLKAVCCAYGWPYFRIGLLKVINDCLSFVGPVLLNKLIKFLQQGSNHYDGYIFAIS 328

Query: 41  LGLSSVIKSFLDT 3
           LGLSSV+KSFLDT
Sbjct: 329 LGLSSVLKSFLDT 341


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  209 bits (531), Expect = 7e-52
 Identities = 111/259 (42%), Positives = 151/259 (58%)
 Frame = -1

Query: 779 KRALQEHSMVYHEWVFRFSQXXXXXXXXXXXWSDYWTLVFCDRVLCFWWIAKPLLTTSHL 600
           K+    H + YH W+   S+                  +  +RVLCFWWI  P+L   HL
Sbjct: 102 KKEHDGHFVGYHRWLHSCSELLVWANIILFTKCASIHCIVFNRVLCFWWILNPILGIFHL 161

Query: 599 VSVYSSLQVMDVCKESSSILLDXXXXXXXXXXXVMQVSTRSRKCGLEDPXXXXXXXXXXX 420
           ++ + SL+V     ES  +L++           + ++S++S    LEDP           
Sbjct: 162 ITNFPSLEVSACIMESLVVLMNLSFGVVINVIRLKRLSSKSSL--LEDPLLSNGGDLEEG 219

Query: 419 CHRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWET 240
            + DL  N  ++W  +TFKF++PVM+ G  KQLD DDL+ L  ++ PS C   +L+ W  
Sbjct: 220 GNHDLENNC-NFWDFMTFKFISPVMNQGVLKQLDSDDLLPLLPDMGPSFCHDIILNSWRA 278

Query: 239 EESKNPSHPSLLKAICYAYGWPYLCLGLLKVFNDCFGFVGPMLLNKLIWFLQRGSGNLDG 60
           + S N  +PSL  A+C AYGWPYLCLGLLKV ND  GF GP+LLNKLI FLQ+GS + DG
Sbjct: 279 QVSNNSLNPSLFSALCNAYGWPYLCLGLLKVINDGIGFAGPLLLNKLIKFLQQGSASWDG 338

Query: 59  YILALSLGLSSVIKSFLDT 3
           Y+LALSLGL+S+IKSFLDT
Sbjct: 339 YLLALSLGLTSIIKSFLDT 357


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  198 bits (504), Expect = 1e-48
 Identities = 116/278 (41%), Positives = 147/278 (52%), Gaps = 20/278 (7%)
 Frame = -1

Query: 776 RALQEHSMVYHEWVFRFSQXXXXXXXXXXXWSDYWTLVFCDRVLCFWWIAKPLLTTSHLV 597
           + L  + + YHEW+FR SQ                  VFC+R LCFWWI K LL   HL 
Sbjct: 34  KELHGNFIAYHEWLFRSSQLIVWTVIIISSMCACLHDVFCNRFLCFWWIMKSLLGILHLH 93

Query: 596 SVYSSLQVMDVCKESSSILLDXXXXXXXXXXXVMQVSTRSRKCGLEDPXXXXXXXXXXXC 417
             + S++V+   K+S  +LLD           + + S +S    +EDP            
Sbjct: 94  RAFGSMEVVKCLKDSCVVLLDVMFGISINIIRIKRASPKSSS--MEDPLLSVDTDIEEGF 151

Query: 416 HRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETE 237
           H D   NA SYW  +TF+ +  VM+ G  KQL FDDL+ LP ++ PS+C   L SCW  +
Sbjct: 152 HGDSG-NAKSYWDHMTFRTITSVMNHGVIKQLGFDDLLSLPNDMEPSTCHDKLSSCWRVQ 210

Query: 236 ESKNPSHPSLLKAICYAYGWPYLCLGLLKVFNDCFGFVGPMLLNKLIWFLQR-------- 81
            S    +P   KAI  AYGWPYLCLGLLKVFND  GF GP+LLNKLI FLQ+        
Sbjct: 211 LSS--PNPFFFKAIFCAYGWPYLCLGLLKVFNDFIGFAGPLLLNKLIRFLQQVILLAFHG 268

Query: 80  ------------GSGNLDGYILALSLGLSSVIKSFLDT 3
                        S   DGY+LALSLGL+S++KSF DT
Sbjct: 269 WKNAVTIIYCFSDSMRWDGYLLALSLGLTSILKSFFDT 306


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  194 bits (493), Expect = 2e-47
 Identities = 92/154 (59%), Positives = 114/154 (74%)
 Frame = -1

Query: 464 LEDPXXXXXXXXXXXCHRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIEL 285
           LEDP            + DL  N  ++W ++TFKF+ PVM+ G  KQLD +DL+ LP ++
Sbjct: 109 LEDPLLSNGVDLEEGGYNDLGNNG-NFWDLMTFKFITPVMNHGVIKQLDPEDLLPLPTDI 167

Query: 284 NPSSCFSTLLSCWETEESKNPSHPSLLKAICYAYGWPYLCLGLLKVFNDCFGFVGPMLLN 105
            PSSC   +LSCW+ + S N S+PSL +A+C AYGWPYLCLGLLKV NDC GF GP+LLN
Sbjct: 168 GPSSCHDVILSCWQAQLSNNDSNPSLFRALCSAYGWPYLCLGLLKVINDCIGFAGPLLLN 227

Query: 104 KLIWFLQRGSGNLDGYILALSLGLSSVIKSFLDT 3
           KLI FLQ+GS NLDGY+LALSLGL+S+IKSFLDT
Sbjct: 228 KLIQFLQQGSVNLDGYLLALSLGLTSIIKSFLDT 261


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 2377

 Score =  192 bits (489), Expect = 5e-47
 Identities = 100/249 (40%), Positives = 139/249 (55%)
 Frame = -1

Query: 749 YHEWVFRFSQXXXXXXXXXXXWSDYWTLVFCDRVLCFWWIAKPLLTTSHLVSVYSSLQVM 570
           YHEW+   S                +  +F +++LC WWI + +      VS Y+  +++
Sbjct: 57  YHEWLSTSSLLAVWIFTSIFANCSNFEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFEIL 116

Query: 569 DVCKESSSILLDXXXXXXXXXXXVMQVSTRSRKCGLEDPXXXXXXXXXXXCHRDLNINAL 390
                S  +LLD              +S+   K    +             H   N +  
Sbjct: 117 KTVNSSFVVLLDVLFGTLAFI-----ISSEHAKSSSMEDSLLYVDVDLEDSHMGNNEDKQ 171

Query: 389 SYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEESKNPSHPS 210
           S W++LTF  V  VMD G++KQL+F+DL+QLP E++PS C + L  CW+ + S+N  +PS
Sbjct: 172 SCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNEMDPSFCHNKLSFCWKDQCSRNCLNPS 231

Query: 209 LLKAICYAYGWPYLCLGLLKVFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILALSLGLS 30
              AIC AYGW Y+ LGLLKV NDC  FVGPMLLN+LI +LQ+GSG  DGY+LA+SLGL+
Sbjct: 232 FFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLLNRLIHYLQQGSGTSDGYVLAISLGLT 291

Query: 29  SVIKSFLDT 3
           S+ KSFLDT
Sbjct: 292 SIFKSFLDT 300


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