BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021476
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    49   3e-09

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 48.9 bits (115), Expect(3) = 3e-09
 Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
 Frame = +3

Query: 486 RDRMGGFIFSMWKNIGSGSNYRAE-CVDVIGVKCAITKGWLKIWAETDSEAAKIAFEIG- 659
           RD    F+ ++  NIG+ +   AE C  ++ ++ A     + +  ETDS     AF  G 
Sbjct: 246 RDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGL 305

Query: 660 EIPWAMQARWENC--------------KRKTNFSADALSKAGAALNEQEVFVLDRKPPWL 797
            +PW M+ARW+NC               R+ N  ADAL+K G  L+     +    PP++
Sbjct: 306 GVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSPPPFI 365



 Score = 32.3 bits (72), Expect(3) = 3e-09
 Identities = 21/89 (23%), Positives = 44/89 (49%)
 Frame = +2

Query: 140 SQRYSGLLISAIISGLVSLWKQRNLVLFEDKNPNLSGCKYYIRLQLKITARLSNDHSFSS 319
           S+  + +L SAII  + S+W +RN   F +K+  ++     I  ++K++  L      S+
Sbjct: 130 SKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNSA 189

Query: 320 VEE*KILSFWNVNPRSKKAP*LKQCAWIP 406
           +++ K+   +N+  + K+        W P
Sbjct: 190 MQDYKVAKLFNIPFKVKRVTPHLDIIWKP 218



 Score = 25.8 bits (55), Expect(3) = 3e-09
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 415 DILKLNTNGAAIGNLGTSGIGVVV 486
           DI+K+N +G+++G      IG+V+
Sbjct: 222 DIVKINCDGSSVGRHPCGSIGIVI 245