BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021466
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43392.1| unknown [Medicago truncatula]                          110   3e-22
gb|AFK41706.1| unknown [Medicago truncatula]                          110   3e-22
ref|XP_003590494.1| Ubiquitin [Medicago truncatula] gi|355479542...   110   3e-22
gb|ACF06493.1| UBQ4 [Elaeis guineensis]                               108   1e-21
ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis...   107   2e-21

>gb|AFK43392.1| unknown [Medicago truncatula]
          Length = 233

 Score =  110 bits (274), Expect = 3e-22
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 14/111 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGGGSD 325
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GGG D
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGGGD 231



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 45  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 104

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/76 (60%), Positives = 56/76 (73%)
 Frame = +2

Query: 89  MEILVMTLTDKILRFDFKSSDKIDSLKAKIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYN 268
           M+I V TLT K +  + +SSD ID+ KAKIQ+KEGIP +QQRLIFAGKQLEDG+T A YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 269 IGVGSLVYPHLILAGG 316
           I   S ++  L L GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>gb|AFK41706.1| unknown [Medicago truncatula]
          Length = 233

 Score =  110 bits (274), Expect = 3e-22
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 14/111 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGGGSD 325
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GGG D
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGGGD 231



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 45  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 104

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/76 (60%), Positives = 57/76 (75%)
 Frame = +2

Query: 89  MEILVMTLTDKILRFDFKSSDKIDSLKAKIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYN 268
           M+I V TLT K +  + +SSD ID++KAKIQ+KEGIP +QQRLIFAGKQLEDG+T A YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 269 IGVGSLVYPHLILAGG 316
           I   S ++  L L GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>ref|XP_003590494.1| Ubiquitin [Medicago truncatula] gi|355479542|gb|AES60745.1|
           Ubiquitin [Medicago truncatula]
          Length = 312

 Score =  110 bits (274), Expect = 3e-22
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 14/111 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGGGSD 325
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GGG D
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGGGD 231



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 45  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 104

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/76 (60%), Positives = 57/76 (75%)
 Frame = +2

Query: 89  MEILVMTLTDKILRFDFKSSDKIDSLKAKIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYN 268
           M+I V TLT K +  + +SSD ID++KAKIQ+KEGIP +QQRLIFAGKQLEDG+T A YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 269 IGVGSLVYPHLILAGG 316
           I   S ++  L L GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>gb|ACF06493.1| UBQ4 [Elaeis guineensis]
          Length = 384

 Score =  108 bits (269), Expect = 1e-21
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 14/111 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGGGSD 325
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG +D
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSAD 383



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 45  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 104

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLMGG 152



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLMGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228



 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD ID++KA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/76 (60%), Positives = 57/76 (75%)
 Frame = +2

Query: 89  MEILVMTLTDKILRFDFKSSDKIDSLKAKIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYN 268
           M+I V TLT K +  + +SSD ID++KAKIQ+KEGIP +QQRLIFAGKQLEDG+T A YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 269 IGVGSLVYPHLILAGG 316
           I   S ++  L L GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
           gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox
           carteri f. nagariensis]
          Length = 229

 Score =  107 bits (266), Expect = 2e-21
 Identities = 69/140 (49%), Positives = 86/140 (61%), Gaps = 15/140 (10%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKEST----------MEILVMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST          M+I V TLT K +  + +SSD I+++KA
Sbjct: 45  FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKA 104

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGGGS-DVSIVSGNE 349
           KIQ+KEGIP +QQRLIFAGKQLEDG+T A YNI   S ++  L L GG    V  ++G E
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKE 164

Query: 350 IDETGPDSAKAETTNNHTEE 409
           I+     S   E      EE
Sbjct: 165 IEIDIEPSDTIERIKERVEE 184



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 14/108 (12%)
 Frame = +2

Query: 35  FAGKQLK----LADYDIQKESTMEIL----------VMTLTDKILRFDFKSSDKIDSLKA 172
           FAGKQL+    LADY+IQKEST+ ++          V TLT K +  D + SD I+ +K 
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKE 180

Query: 173 KIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYNIGVGSLVYPHLILAGG 316
           +++EKEGIP  QQRLIFAGKQ+ D +    YNI  GS+++  L L GG
Sbjct: 181 RVEEKEGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHLVLALRGG 228



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/76 (59%), Positives = 57/76 (75%)
 Frame = +2

Query: 89  MEILVMTLTDKILRFDFKSSDKIDSLKAKIQEKEGIPTNQQRLIFAGKQLEDGQTFAHYN 268
           M+I V TLT K +  + +SSD I+++KAKIQ+KEGIP +QQRLIFAGKQLEDG+T A YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 269 IGVGSLVYPHLILAGG 316
           I   S ++  L L GG
Sbjct: 61  IQKESTLHLVLRLRGG 76