BLASTX nr result

ID: Coptis23_contig00021443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021443
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85646.1| predicted protein [Hordeum vulgare subsp. vulgar...    66   3e-09
ref|XP_002524229.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_003563895.1| PREDICTED: uncharacterized protein At2g39795...    62   4e-08
ref|XP_003563896.1| PREDICTED: uncharacterized protein At2g39795...    61   1e-07
ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycin...    59   5e-07

>dbj|BAJ85646.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529155|dbj|BAK00971.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 262

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
 Frame = -3

Query: 390 AAGNKIGANAKLAQVIQSKI-----SNQGGLV----PDGFPFEIIDNPGEQTLVLKRQFS 238
           AA +KI ++  L +VI S+I     S +G +     P+ FPFEIIDNPG+Q++VLKR+F 
Sbjct: 66  AAPSKISSDENLTRVIDSEIECAVESEEGSVQQIDPPEDFPFEIIDNPGDQSIVLKREF- 124

Query: 237 CASDETIQVDV-NNFDGPDDYHE--------------ICFLVTISKQHGPLLQLHCIGSP 103
               ETI+  V  NFD  +D +               +  +VT+ K  GP+L+  C    
Sbjct: 125 --GRETIKATVYTNFDTEEDLNNDDSDAENDDDIKPALQMVVTVEKPQGPILEFEC---N 179

Query: 102 YNDIE--IKTLHLKEDSPHSSSN 40
           +ND E  I+T+ L     + + N
Sbjct: 180 FNDDELAIETMRLLNRDANLTDN 202


>ref|XP_002524229.1| conserved hypothetical protein [Ricinus communis]
           gi|223536506|gb|EEF38153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 24/129 (18%)
 Frame = -3

Query: 381 NKIGANAKLAQVIQSKIS--------NQGGLVPDGFPFEIIDNPGEQTLVLKRQFSCASD 226
           NK  A+  L +VI S+I         ++   +P GFPF+I+DNPG+QT++L R++     
Sbjct: 53  NKPSASESLLRVIDSEIKIAQETDDLDRVEAIPQGFPFKIVDNPGQQTIILTREY---DG 109

Query: 225 ETIQVDVNN-----------FDGPDDYHE-----ICFLVTISKQHGPLLQLHCIGSPYND 94
           E ++V+V+             DG DD  +     I   VT+SK +G  L+ HC+  P ++
Sbjct: 110 ELVKVEVHMPDLVTGEDNEVDDGTDDVEKPTQSSIPLFVTVSKNNGTSLEFHCVAYP-DE 168

Query: 93  IEIKTLHLK 67
           I I++L +K
Sbjct: 169 IAIESLSVK 177


>ref|XP_003563895.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           isoform 1 [Brachypodium distachyon]
          Length = 266

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 25/126 (19%)
 Frame = -3

Query: 387 AGNKIGANAKLAQVIQSKI---------SNQGGLVPDGFPFEIIDNPGEQTLVLKRQFSC 235
           + +K+ A+  L +VI S+I         S Q    P+ FPFEIIDNPG+Q+++LKR+F  
Sbjct: 70  SSSKVSADENLRRVIDSEIECVVESEEASAQQIDPPEDFPFEIIDNPGDQSVILKREF-- 127

Query: 234 ASDETIQVDV-NNFDGPDDYHE---------------ICFLVTISKQHGPLLQLHCIGSP 103
            + ETI+  V  NFD  +D +                I  +VT+ K  GP+L+  C    
Sbjct: 128 -AGETIKATVYTNFDAEEDLNNDDSDAEKDEESFKPAIQMVVTVEKPEGPILEFDC---N 183

Query: 102 YNDIEI 85
           +ND E+
Sbjct: 184 FNDDEL 189


>ref|XP_003563896.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           isoform 2 [Brachypodium distachyon]
          Length = 267

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 26/127 (20%)
 Frame = -3

Query: 387 AGNKIGANAKLAQVIQSKI---------SNQGGL-VPDGFPFEIIDNPGEQTLVLKRQFS 238
           + +K+ A+  L +VI S+I         S Q  +  P+ FPFEIIDNPG+Q+++LKR+F 
Sbjct: 70  SSSKVSADENLRRVIDSEIECVVESEEASAQKQIDPPEDFPFEIIDNPGDQSVILKREF- 128

Query: 237 CASDETIQVDV-NNFDGPDDYHE---------------ICFLVTISKQHGPLLQLHCIGS 106
             + ETI+  V  NFD  +D +                I  +VT+ K  GP+L+  C   
Sbjct: 129 --AGETIKATVYTNFDAEEDLNNDDSDAEKDEESFKPAIQMVVTVEKPEGPILEFDC--- 183

Query: 105 PYNDIEI 85
            +ND E+
Sbjct: 184 NFNDDEL 190


>ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycine max]
           gi|255640060|gb|ACU20321.1| unknown [Glycine max]
          Length = 253

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 27/137 (19%)
 Frame = -3

Query: 390 AAGNKIGANAKLAQVIQSKIS--------NQGGLVPDGFPFEIIDNPGEQTLVLKRQFSC 235
           A+  K  ++  L +VI+S+I         N    VP  FPF+IID+PG+QT++L+R +  
Sbjct: 58  ASKKKPTSDENLLRVIESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTIMLERTY-- 115

Query: 234 ASDETIQVDVN---------NFDGPDDYHE------ICFLVTISKQHGPLLQLHCIGSP- 103
             DE I+V+V+         N D  D+  E      I   +++ K+ GP L+ +C+G P 
Sbjct: 116 -QDEEIKVEVHMPDLVTGEENDDDNDNQSERTAQSSIPLSISVHKKDGPYLEFNCVGYPD 174

Query: 102 ---YNDIEIKTLHLKED 61
               + + +K   L ED
Sbjct: 175 EIVIDGLSVKNPDLTED 191


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